| Year | Team Name | League | Division | W | L | Pct | Rank | Overall | Managers | Stadium | Top Draft Pick | Playoffs | |
| 2012 | Pepperdine | Waves | WCC | - | 16 | 8 | .667 | 1 | 36-23 | Steve Rodriguez | Eddy D. Field Stadium | Jon Moscot (#142) | Conference Champions,CWS Regionals |
| 2011 | Pepperdine | Waves | WCC | - | 7 | 14 | .333 | 7 | 22-34 | Steve Rodriguez | Eddy D. Field Stadium | Brian Humphries (#438) | dnq |
| 2010 | Pepperdine | Waves | WCC | - | 12 | 9 | .571 | 3 | 24-30 | Steve Rodriguez | Eddy D. Field Stadium | Cole Cook (#150) | dnq |
| 2009 | Pepperdine | Waves | WCC | - | 12 | 9 | .571 | 4 | 31-23 | Steve Rodriguez | Eddy D. Field Stadium | Nathan Newman (#510) | dnq |
| 2008 | Pepperdine | Waves | WCC | - | 14 | 6 | .700 | 2 | 38-21 | Steve Rodriguez | Eddy D. Field Stadium | Chase D'arnaud (#114) | CWS Regionals |
| 2007 | Pepperdine | Waves | WCC | - | 14 | 7 | .667 | 3 | 35-22 | Steve Rodriguez | Eddy D. Field Stadium | Barry Enright (#73) | CWS Regionals |
| 2006 | Pepperdine | Waves | WCC | - | 15 | 6 | .714 | 1 | 42-21 | Steve Rodriguez | Eddy D. Field Stadium | Chad Tracy (#88) | Conf Champions, CWS Regionals, #21 in Nation |
| 2005 | Pepperdine | Waves | WCC | West | 21 | 9 | .700 | 1 | 41-23 | Steve Rodriguez | Eddy D. Field Stadium | Paul Coleman (#270) | Conf Champions, CWS Regionals , #24 in nation |
| 2004 | Pepperdine | Waves | WCC | West | 19 | 11 | .633 | 1 | 30-32 | Steve Rodriguez | Eddy D. Field Stadium | Jacob Barrack (#572) | Conf. Champs, CWS Regionals |
| 2003 | Pepperdine | Waves | WCC | Coast | 23 | 7 | .767 | 1 | 36-25 | Frank Sanchez | Eddy D. Field Stadium | Chris Kelly (#172) | Conf. Finalists, CWS Regionals |
| 2002 | Pepperdine | Waves | WCC | Coast | 18 | 12 | .600 | 1 | 31-32 | Frank Sanchez | Eddy D. Field Stadium | Kevin Beavers (#475) | Conf. Finalists |