| East | W | L | Pct | GB |
| Atlanta | 106 | 56 | .654 | -- |
| NY Mets | 88 | 74 | .543 | 18.0 |
| Philadelphia | 75 | 87 | .463 | 31.0 |
| Montreal | 65 | 97 | .401 | 41.0 |
| Florida | 54 | 108 | .333 | 52.0 |
| Phase | Rnd | Ovl | Player | Pos | Current Status |
| June-Reg | 1 | 21 | Jason Tyner | OF | Retired |
| June-Reg | 2 | 64 | Pat Strange | P | Retired |
| June-Reg | 3 | 94 | Jason Saenz | P | Retired |
| June-Reg | 4 | 124 | Jason Moates | P | Retired |
| June-Reg | 5 | 154 | Craig Brazell | IF | Inactive |
| June-Reg | 6 | 184 | Marvin Seale | OF | Retired |
| June-Reg | 7 | 214 | Ryan Smith | C | Retired |
| June-Reg | 8 | 244 | Vince Vazquez | Retired | |
| June-Reg | 9 | 274 | Todd Bellhorn | P | Retired |
| June-Reg | 10 | 304 | Larnell Hamn | OF | Retired |
| June-Reg | 11 | 334 | Josh Perich | OF | Retired |
| June-Reg | 12 | 364 | Ryan Budde | Free Agent | |
| June-Reg | 13 | 394 | Andy Cook | P | Retired |
| June-Reg | 14 | 424 | Gil Velazquez | SS | MIA Minors |
| June-Reg | 15 | 454 | David Hunter | 1B | Retired |
| June-Reg | 16 | 484 | Scott Bikowski | OF | Retired |
| June-Reg | 17 | 514 | Ty Wigginton | IF | STL 40m |
| June-Reg | 18 | 544 | Brian Cole | OF | Deceased |
| June-Reg | 19 | 574 | Frank Graham | P | Retired |
| June-Reg | 20 | 604 | Jason Clements | SS | Retired |
| June-Reg | 21 | 634 | Roberto Lugo | 1B | Retired |
| June-Reg | 22 | 664 | Brian Shipp | 2B | Retired |
| June-Reg | 23 | 694 | Jaime Cerda | P | Retired |
| June-Reg | 24 | 724 | Gene Gobbel | SS | Retired |
| June-Reg | 25 | 754 | John Wesley | P | Retired |
| June-Reg | 26 | 784 | Jason Osborn | C | Retired |
| June-Reg | 27 | 814 | Justin Smith | P | Retired |
| June-Reg | 28 | 844 | Marc Ludvigsen | RF | Retired |
| June-Reg | 29 | 874 | Alex Zardis | 2B | Retired |
| June-Reg | 30 | 904 | Alex Stoffels | C | Retired |
| June-Reg | 31 | 934 | Rene Vega | P | Retired |
| June-Reg | 32 | 964 | Pedro Rodriguez | P | Inactive |
| June-Reg | 33 | 994 | Greg Halvorson | P | Retired |
| June-Reg | 34 | 1023 | Billy Martin | 1B | Retired |
| June-Reg | 35 | 1054 | Edwin Franco | Retired | |
| June-Reg | 36 | 1084 | Earl Snyder | 1B | Retired |
| June-Reg | 37 | 1114 | Mike Wodnicki | P | Retired |
| June-Reg | 38 | 1144 | Gary Bohannon | P | Retired |
| June-Reg | 39 | 1174 | Justin Kurtz | P | Retired |
| June-Reg | 40 | 1204 | Michael Prokop | P | Retired |
| June-Reg | 41 | 1234 | Joe Yarbrough | P | Retired |
| June-Reg | 42 | 1263 | Ben Leuthard | P | Retired |
| June-Reg | 43 | 1291 | Tom Paciorek | OF-1B | Retired |
| June-Reg | 44 | 1317 | Ruben Feliciano | P | Retired |
| June-Reg | 45 | 1341 | Chris Nelson | OF | Inactive |
| June-Reg | 46 | 1364 | Ken Chenard | P | Retired |
| June-Reg | 47 | 1385 | Benjamin Vargas | P | Inactive |
| June-Reg | 48 | 1405 | Christopher Taylor | OF | Inactive |
| June-Reg | 49 | 1422 | Newton Hausmann | P | Inactive |
| June-Reg | 50 | 1438 | Aaron Hee | P | Retired |