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| | 1 | 37 | Trevor Bell | $$ | rhp | 18 | 10/12/1986 | 6-1 | 190 | L | R | A | | Crescenta Valley High School (La Crescenta,CA) |
| | 2 | 58 | Ryan Mount | $$ | ss | 18 | 8/17/1986 | 6-1 | 180 | L | R | A | | Ayala High School (Chino Hills,CA) |
| | 2 | 71 | P.J. Phillips | $$ | ss | 18 | 9/23/1986 | 6-3 | 170 | R | R | A | | Redan High School (Stone Mountain,GA) |
| | 3 | 103 | Sean O'Sullivan | $$ | RHP | 17 | 9/1/1987 | 6-1 | 220 | R | R | A | | Valhalla High School (El Cajon,CA) |
| | 4 | 133 | Brian Matusz | | lhp | 18 | 2/11/1987 | 6-4 | 170 | L | L | College | | St. Mary's High School (Phoenix,AZ) |
| | 5 | 163 | Tom Mendoza | | rhp | 17 | 8/18/1987 | 6-2 | 185 | R | R | A+ | | Monsignor Pace High School (Opa Locka,FL) |
| | 6 | 193 | Jerome Moore | | of | 18 | 6/29/1987 | 6-0 | 185 | L | R | Rookie | | North Caddo High School (Vivian,LA) |
| | 7 | 223 | Robert Romero | | RHP | 20 | 3/28/1985 | 5-10 | 190 | R | R | A | | Grayson County Junior College |
| | 8 | 253 | Matt Hall | | SS | 18 | 3/10/1987 | 6-2 | 180 | R | R | College | | Horizon High School (Scottsdale,AZ) |
| | 9 | 283 | Robert Mosebach | | rhp | 20 | 9/14/1984 | 6-4 | 195 | R | R | AA | | Hillsborough Community College |
| | 10 | 313 | Peter Bourjos | | OF | 18 | 3/31/1987 | 6-1 | 195 | R | R | A | | Notre Dame Prep High School (Scottsdale,AZ) |
| | 11 | 343 | Tim Murphy | | of | 18 | 5/7/1987 | 6-2 | 190 | L | L | College | | Rancho Buena Vista High School (Vista,CA) |
| | 12 | 373 | Greg Dini | | c | 22 | 1/18/1983 | 6-2 | 200 | R | R | A+ | | Tulane University |
| | 13 | 403** | Bryce Cox | | rhp | 20 | 8/10/1984 | 6-4 | 205 | R | R | AA | | Rice University |
| | 14 | 433 | Stephen Brock | | RHP | 19 | 11/17/1985 | 6-4 | 210 | R | R | - | | Chipola College |
| | 15 | 463 | Brad Coon | | CF | 22 | 12/11/1982 | 6-1 | 175 | L | L | AA | | Trevecca Nazarene University (Tenn.) |
| | 16 | 493 | Darrell Sales | | 1b | 19 | 9/12/1985 | 6-1 | 210 | R | R | Rookie | | West Valley College |
| | 17 | 523 | Ryan Pressley | | 1B | 18 | 9/29/1986 | 6-6 | 255 | B | R | Rookie | | Evans High School (Evans,GA) |
| | 18 | 553 | Jim West | | rhp | 20 | 12/21/1984 | 6-2 | 175 | R | R | A+ | | Chandler-Gilbert Community College |
| | 19 | 583 | Anthony Sullivan | | rhp | | | | | | | A | | St. John's University |
| | 20 | 613 | Martinez Allen | | of | 19 | 2/28/1986 | 5-10 | 185 | R | R | - | | North Florida Community College |
| | 21 | 643 | Brad Suttle | | 3B | 19 | 1/24/1986 | 6-2 | 215 | S | R | Rookie | | Boerne High School (Boerne,TX) |
| | 22 | 673** | Chris Nash | | 1b | 18 | 2/22/1987 | 6-4 | 230 | R | R | A- | | Marquette High School (Chesterfield,MO) |
| | 23 | 703** | Deunte Heath | | rhp | 19 | 8/28/1985 | 6-4 | 205 | R | R | A+ | | Lake City Community College |
| | 24 | 733 | Dallas Morris | | 3B | 22 | 7/13/1982 | 6-2 | 210 | R | R | A+ | | University of Louisiana-Lafayette |
| | 25 | 763 | Brok Butcher | | rhp | 21 | 10/13/1983 | 6-1 | 180 | R | R | AA | | Oxnard College |
| | 26 | 793 | Kevin Lynch | | RHP | 22 | 1/2/1983 | 6-2 | 200 | R | R | AAA | | Florida State University |
| | 27 | 823 | Colby Overstreet | | 1b | 21 | 10/15/1983 | 6-4 | 220 | L | R | Rookie | | Oklahoma City University |
| | 28 | 853 | Blair Brejtfus | | rhp | 18 | 11/27/1986 | 6-3 | 215 | R | R | - | | Arcadia High School (Phoenix,AZ) |
| | 29 | 883 | Vincent Scarduzio | | 1B | | | | | | | - | | Broward Community College |
| | 30 | 913 | Neil Medchill | | c | 18 | 6/25/1987 | 6-3 | 170 | L | R | - | | Lake Orion High School (Lake Orion,MI) |
| | 31 | 943 | Tim Didjurgis | | rhp | 22 | 12/16/1982 | 6-5 | 230 | R | R | A | | Regis University (Colorado) |
| | 32 | 973 | Braden Wells | | OF | 18 | 7/13/1986 | 5-11 | 185 | R | R | College | | Dixie State College of Utah |
| | 33 | 1003 | Marco Albano | | ss | 21 | 8/26/1983 | 5-11 | 215 | R | R | A | | Boston College |
| | 34 | 1033 | Ryan Schlitter | | RHP | 19 | 12/21/1985 | 6-6 | 220 | R | R | - | | Lake City Community College |
| | 35 | 1063** | Chris Davis | | 3b | 19 | 3/17/1986 | 6-3 | 210 | L | R | AA | | Navarro College |
| | 36 | 1093 | Jacob Dixon | | rhp | 22 | 4/26/1983 | 6-5 | 190 | R | R | Rookie | | University of North Florida |
| | 37 | 1123 | Jeremy Haynes | | RHP | 19 | 5/28/1986 | 6-2 | 180 | R | R | A | | Tallahassee Community College |
| | 38 | 1153 | Flint Wipke | | c | 22 | 1/22/1983 | 6-0 | 195 | R | R | AA | | Georgia Southern University |
| | 39 | 1182 | Brent Milleville | | c | 18 | 2/8/1987 | 6-3 | 0 | R | R | College | | Maize High School (Maize,KS) |
| | 40 | 1211** | Rian Kiniry | | OF | 18 | 12/12/1986 | 5-10 | 160 | L | R | Rookie | | Chaminade-Madonna High School (Hollywood,FL) |
| | 41 | 1240 | Joseph Klein | | rhp | 18 | 4/16/1987 | 6-2 | 195 | R | R | - | | Patuxent High School (Lusby,MD) |
| | 42 | 1269 | Carlos Del Rosario | | OF | 19 | 1/14/1986 | 6-0 | 185 | L | L | - | | George Washington High School (New York,NY) |
| | 43 | 1298 | Brent Solich | | lhp | 19 | 8/24/1985 | 5-11 | 175 | L | L | College | | Manatee Community College |
| | 44 | 1327 | Michael Bunton | | lhp | 18 | 10/23/1986 | 6-4 | 210 | L | L | A- | | Tallahassee Community College |
| | 45 | 1356** | Shay Conder | | C | 18 | 1/1/1987 | 6-2 | 180 | R | R | - | | |
| | 46 | 1385 | Julian Laurean | | 2B | | | | | | | - | | Chandler-Gilbert Community College |
| | 47 | 1414 | Seth Loman | | 1b | 19 | 12/16/1985 | 6-3 | 225 | B | R | Rookie | | Lamar Community College |
| | 48 | 1442 | Cody Fuller | | of | 22 | 9/19/1982 | 6-1 | 199 | R | R | AA | | Texas Tech University |
| | 49 | 1469 | Anthony Vasquez | | of | 18 | 9/19/1986 | 6-0 | 175 | L | L | College | | Ronald Reagan High School (San Antonio,TX) |
| | 50 | 1496 | Buster Posey | | RHP | 18 | 3/27/1987 | 6-1 | 180 | R | R | College | | Lee County High School (Leesburg,GA) |
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