| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 10 | June-Reg | Tim Lincecum | | P | 22 | 6/15/1984 | 5-10 | 155 | L | R | MLB | 2007-2008 | University of Washington |
| 1 | 33 | June-Reg | Emmanuel Burriss | | SS | 21 | 1/17/1985 | 6-0 | 170 | B | R | A- | | Kent State University |
| 3 | 89 | June-Reg | Clayton Tanner | | P | 18 | 12/5/1987 | 6-2 | 185 | L | L | A+ | | De La Salle High School (Concord,CA) |
| 4 | 116 | June-Reg | Ben Snyder | | P | 20 | 7/20/1985 | 6-1 | 175 | L | L | A+ | | Ball State University |
| 5 | 146 | June-Reg | Michael McBryde | | CF | 21 | 3/22/1985 | 6-1 | 170 | R | R | A+ | | Florida Atlantic University |
| 6 | 176 | June-Reg | Ryan Rohlinger | | SS | 22 | 10/7/1983 | 6-1 | 180 | R | R | A+ | | University of Oklahoma |
| 7 | 206 | June-Reg | Brett Pill | | 1B | 21 | 9/9/1984 | 6-4 | 215 | R | R | A+ | | California State University, Fullerton |
| 8 | 236 | June-Reg | Matthew Klimas | | C | 18 | 7/3/1987 | 5-11 | 185 | R | R | A | | Texarkana College |
| 9 | 266 | June-Reg | Brian Bocock | | SS | 21 | 3/9/1985 | 5-11 | 185 | R | R | MLB | 2008-2008 | Stetson University |
| 10 | 296 | June-Reg | Ryan Paul | | P | 21 | 8/10/1984 | 6-6 | 225 | L | L | A+ | | California State University, Fullerton |
| 11 | 326 | June-Reg | Gib Hobson | | P | 21 | 1/13/1985 | 6-3 | 195 | R | R | A- | | North Carolina State University |
| 12 | 356 | June-Reg | Matthew Weston | | OF | 22 | 5/20/1984 | 6-3 | 215 | L | L | A | | University of Houston |
| 13 | 386 | June-Reg | Brad Boyer | | 2B | 22 | 10/4/1983 | 6-0 | 185 | L | R | AA | | University of Arizona |
| 14 | 416 | June-Reg | Eric Stolp | | P | 21 | 8/18/1984 | 6-3 | 182 | R | R | A- | | University of the Pacific |
| 15 | 446 | June-Reg | Andrew Barbosa | | P | 18 | 11/18/1987 | 6-8 | 205 | R | L | - | | Riverview High School (Sarasota,FL) |
| 16 | 476 | June-Reg | Paul Oseguera | | P | | | | | | | AA | | UCLA |
| 17 | 506 | June-Reg | Kevin Pucetas | | P | 21 | 11/27/1984 | 6-4 | 225 | R | L | A+ | | Limestone College |
| 18 | 536 | June-Reg | Jeff Stallings | | P | | | | | | | College | | North Carolina State University |
| 19 | 566 | June-Reg | Tyler Graham | | CF | 22 | 1/25/1984 | 6-0 | 180 | R | R | A+ | | Oregon State University |
| 20 | 596 | June-Reg | Adam Paul | | P | 22 | 2/17/1984 | 6-5 | 210 | R | R | A | | University of North Carolina-Wilmington |
| 21 | 626 | June-Reg | Steven Calicutt | | P | 22 | 2/7/1984 | 6-2 | 190 | L | L | A | | East Tennessee State University |
| 22 | 656 | June-Reg | Robert Felmy | | RF | 22 | 4/29/1984 | 5-11 | 180 | L | L | A+ | | University of Georgia |
| 23 | 686 | June-Reg | Eddie Crow | | P | 18 | 3/15/1988 | 6-3 | 205 | R | R | - | | Sitka (Sitka,AK) |
| 24 | 716 | June-Reg | Jeffrey Walters | | P | 18 | 11/6/1987 | 6-3 | 170 | R | R | - | | Olympia (Orlando,FL) |
| 25 | 746 | June-Reg | Joseph Moos | | SS | 18 | 3/14/1988 | 5-11 | 170 | R | R | - | | Williston High School (Williston,FL) |
| 26 | 776 | June-Reg | Shane Mathews | | P | | | | | | | A | | East Carolina University |
| 27 | 806 | June-Reg | Sean Van Elderen | | RF | 23 | 9/21/1982 | 6-3 | 220 | R | R | A- | | Mesa State College |
| 28 | 836 | June-Reg | Dusty Harvard | | CF | 18 | 10/28/1987 | 6-2 | 0 | L | R | College | | Natrona County High School (Casper,WY) |
| 29 | 866 | June-Reg | Nick Liles | | 2B | 18 | 7/23/1987 | 6-0 | 165 | R | R | College | | Sarasota High School (Sarasota,FL) |
| 30 | 896 | June-Reg | Daryl Maday | | P | 20 | 8/12/1985 | 6-2 | 225 | R | R | AA | | University of Arkansas |
| 31 | 926 | June-Reg | Matthew McMurtry | | P | 23 | 4/27/1983 | 5-11 | 170 | L | L | - | | Minnesota State University Mankato |
| 32 | 956 | June-Reg | Matthew Fairel | | P | 18 | 7/8/1987 | 6-3 | 210 | L | L | College | | Winter Haven High School (Winter Haven,FL) |
| 33 | 986 | June-Reg | Christopher Siewert | | C | | | | | | | College | | University of Tennessee |
| 34 | 1016 | June-Reg | Jared Cranston | | P | 21 | 4/18/1985 | 6-2 | 195 | B | L | A | | University of Nebraska |
| 35 | 1046 | June-Reg | Adam Cowart | | P | 22 | 8/18/1983 | 6-2 | 190 | R | R | AA | | Kansas State University |
| 36 | 1076 | June-Reg | Matt Downs | | 3B | 22 | 3/19/1984 | 6-2 | 190 | R | R | A+ | | University of Alabama |
| 37 | 1106 | June-Reg | Lance Salsgiver | | CF | 22 | 11/21/1983 | 6-0 | 175 | R | R | A- | | Harvard University |
| 38 | 1136 | June-Reg | Ryan Butner | | P | 18 | 12/21/1987 | 6-4 | 0 | R | R | College | | Hialeah High School (Hialeah,FL) |
| 39 | 1166 | June-Reg | Lee Darracott | | SS | 20 | 8/7/1985 | 6-4 | 180 | R | R | - | | Vernon College |
| 40 | 1196 | June-Reg | Jonathon Amaya | | CF | 17 | 11/25/1988 | 6-2 | 188 | R | R | - | | Diamond Bar High School (Diamond Bar,CA) |
| 41 | 1226 | June-Reg | Bo Merrell | | SS | 20 | 6/19/1986 | 6-3 | 185 | R | R | - | | Seward County Community College |
| 42 | 1256 | June-Reg | Brandon Grabham | | P | 20 | 1/30/1986 | 6-5 | 220 | R | R | - | | Grayson County Junior College |
| 43 | 1285 | June-Reg | Kevin Boggan | | P | 21 | 5/2/1985 | 6-2 | 190 | R | R | A | | Boston College |
| 44 | 1314 | June-Reg | Kyle Lafrenz | | C | 19 | 2/6/1987 | 6-1 | 190 | R | R | - | | Marshalltown Community College |
| 45 | 1343 | June-Reg | Matt Speake | | P | 19 | 8/19/1986 | 6-0 | 200 | R | R | - | | New Mexico Junior College |
| 46 | 1372 | June-Reg | Taylor Hammack | | P | 18 | 3/13/1988 | 6-3 | 210 | L | L | - | | Angleton (Angleton,TX) |
| 47 | 1400 | June-Reg | Ryan Bradley | | P | 17 | 7/15/1988 | 6-1 | 180 | B | L | - | | Mattoon (Mattoon,IL) |
| 48 | 1428 | June-Reg | Evan Bush | | 2B | 22 | 4/25/1984 | 6-2 | 195 | R | R | AAA | | University of Alabama |
| 49 | 1456 | June-Reg | Jonathan Batts | | C | | | | | | | College | | University of North Carolina-Wilmington |
| 50 | 1484 | June-Reg | Robert Davis | | C | 22 | 12/31/1983 | 6-0 | 195 | R | R | A- | | University of South Carolina at Aiken |
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