| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 28 | June-Reg | Colby Rasmus | $$ | of | 18 | 8/11/1986 | 6-1 | 175 | L | L | AAA | | Russell County High School (Victorville,CA) |
| 1 | 30 | June-Reg | Tyler Greene | $$ | ss | 21 | 8/17/1983 | 6-2 | 185 | R | R | AA | | Georgia Tech |
| 1 | 43 | June-Reg | Mark Mccormick | $$ | rhp | 21 | 10/15/1983 | 6-2 | 195 | R | R | AA | | Baylor University |
| 1 | 46 | June-Reg | Tyler Herron | $$ | rhp | 18 | 8/5/1986 | 6-3 | 190 | R | R | AA | | Wellington Christian High School (Wellington,FL) |
| 2 | 70 | June-Reg | Josh Wilson | $$ | rhp | 18 | 9/6/1986 | 5-11 | 180 | R | R | A | | Whitehouse High School (Whitehouse,TX) |
| 2 | 78 | June-Reg | Nick Webber | $$ | rhp | 21 | 5/9/1984 | 6-7 | 210 | R | R | AAA | | Central Missouri State University |
| 3 | 110 | June-Reg | Daryl Jones | | OF | 18 | 6/25/1987 | 5-11 | 180 | L | L | A+ | | Spring High School (Spring,TX) |
| 4 | 140 | June-Reg | Bryan Anderson | | c | 18 | 12/16/1986 | 6-0 | 190 | L | R | AAA | | Simi Valley High School (Simi Valley,CA) |
| 5 | 170 | June-Reg | Mitchell Boggs | | rhp | 21 | 2/15/1984 | 6-3 | 195 | R | R | MLB | 2008-2008 | University of Georgia |
| 6 | 200 | June-Reg | Wilfrido Pujols | | of | 17 | 9/11/1987 | 6-1 | 185 | R | R | Rookie | | Fort Osage High School (Independence,MO) |
| 7 | 230 | June-Reg | Nick Stavinoha | | OF | 23 | 5/3/1982 | 6-2 | 225 | R | R | AAA | | Louisiana State University |
| 8 | 260 | June-Reg | Jason Cairns | | RHP | 22 | 11/13/1982 | 6-4 | 205 | R | R | A | | Central Michigan University |
| 9 | 290 | June-Reg | Zach Zuercher | | lhp | 21 | 4/10/1984 | 6-2 | 201 | L | L | AA | | University of Rhode Island |
| 10 | 320 | June-Reg | Randy Roth | | C | 23 | 3/5/1982 | 6-1 | 205 | R | R | A+ | | Southeastern Louisiana University |
| 11 | 350 | June-Reg | Steve Gonzalez | | c | 18 | 5/31/1987 | 5-10 | 190 | R | R | A- | | |
| 12 | 380** | June-Reg | Daniel McCutchen | | rhp | 22 | 9/26/1982 | 6-1 | 195 | R | R | AAA | | University of Oklahoma |
| 13 | 410 | June-Reg | Malcolm Owens | | of | 21 | 3/23/1984 | 6-3 | 205 | R | R | Rookie | | San Bernardino Valley College |
| 14 | 440 | June-Reg | Michael Repole | | RHP | 21 | 7/12/1983 | 6-5 | 225 | R | R | A- | | Birmingham-Southern College |
| 15 | 470 | June-Reg | Adam Daniels | | LHP | 22 | 8/16/1982 | 6-2 | 190 | L | L | AA | | Oklahoma State University |
| 16 | 500 | June-Reg | Matt Lane | | rhp | 20 | 8/17/1984 | 6-8 | 225 | R | R | A | | University of Louisiana-Monroe |
| 17 | 530 | June-Reg | Michael Cooper | | RHP | 21 | 2/2/1984 | 6-2 | 205 | R | R | AA | | Fresno State University |
| 18 | 560 | June-Reg | Brandon Garner | | ss | 18 | 8/27/1986 | 6-0 | 165 | R | R | A+ | | Yale High School (Melvin,MI) |
| 19 | 590 | June-Reg | Miers Quigley | | lhp | 18 | 1/27/1987 | 6-4 | 220 | L | L | College | | Roswell High School (Roswell,GA) |
| 20 | 620 | June-Reg | Shaun Garceau | | rhp | 17 | 8/28/1987 | 6-1 | 185 | B | R | A+ | | Royal Palm Beach High School (West Palm Beach,FL) |
| 21 | 650** | June-Reg | Ryan Rohlinger | | SS | 21 | 10/7/1983 | 6-1 | 180 | R | R | A+ | | University of Oklahoma |
| 22 | 680 | June-Reg | Jaime Garcia | | lhp | 18 | 7/8/1986 | 6-2 | 200 | L | L | AAA | | |
| 23 | 710 | June-Reg | A.J. Van Slyke | | 1b | 21 | 11/19/1983 | 6-2 | 210 | L | R | AA | | University of Kansas |
| 24 | 740 | June-Reg | David Phillips | | RHP | 20 | 5/21/1985 | 6-3 | 200 | L | R | Rookie | | El Paso Community College |
| 25 | 770 | June-Reg | Adam Rodgers | | 1b | 22 | 12/1/1982 | 6-1 | 200 | R | R | A | | Rice University |
| 26 | 800 | June-Reg | Steven Blackwood | | OF | | | | | | | College | | Georgia Tech |
| 27 | 830 | June-Reg | Charles Carter | | of | 22 | 9/27/1982 | 6-2 | 215 | R | R | A | | Texas A&M University-Corpus Christi |
| 28 | 860 | June-Reg | Trey Hearne | | rhp | 21 | 8/19/1983 | 6-1 | 190 | R | R | A+ | | Texas A&M University-Corpus Christi |
| 29 | 890 | June-Reg | Reid Price | | LHP | | | | | | | Ind | | College of Charleston |
| 30 | 920 | June-Reg | Matt Trent | | rhp | 22 | 8/7/1982 | 6-3 | 218 | R | R | A+ | | Wingate University |
| 31 | 950 | June-Reg | Christian Lopez | | ss | 18 | 1/23/1987 | 6-0 | 158 | R | R | A | | Juana Colon (Comerio,PR) |
| 32 | 980 | June-Reg | Casey Rowlett | | OF | 22 | 2/8/1983 | 5-8 | 175 | R | R | AAA | | University of Arkansas |
| 33 | 1010 | June-Reg | Scott Vander Weg | | rhp | 22 | 12/14/1982 | 6-3 | 210 | R | R | AA | | Lamar University |
| 34 | 1040 | June-Reg | Kyle Sadlowski | | RHP | 21 | 6/19/1984 | 6-3 | 190 | R | R | AA | | Kutztown University of Pennsylvania |
| 35 | 1070 | June-Reg | Cory Rauschenberger | | rhp | 20 | 7/31/1984 | 6-1 | 185 | R | R | AAA | | Alabama Southern Community College |
| 36 | 1100 | June-Reg | Armando Carrasco | | rhp | 19 | 7/1/1985 | 6-1 | 205 | R | R | A | | Saddleback College |
| 37 | 1130 | June-Reg | Kenny Maiques | | RHP | 20 | 6/25/1985 | 6-1 | 185 | R | R | A+ | | Rio Hondo Junior College |
| 38 | 1160 | June-Reg | Steve Junker | | lhp | 18 | 9/18/1986 | 6-5 | 195 | L | L | - | | Valley Forge High School (Parma Heights,OH) |
| 39 | 1189 | June-Reg | Tyler Leach | | rhp | 18 | 9/8/1986 | 6-3 | 200 | R | R | Rookie | | Kings Mountain High School (Kings Mountain,NC) |
| 40 | 1218 | June-Reg | Jesse Schoendienst | | 2B | 22 | 7/10/1982 | 5-10 | 160 | R | R | Rookie | | Old Dominion University |
| 41 | 1247 | June-Reg | David Fonseca | | ss | 18 | 8/28/1986 | 6-0 | 180 | R | R | A | | Thousand Oaks High School (Thousand Oaks,CA) |
| 42 | 1276 | June-Reg | Josh Schwartz | | LHP | 23 | 2/11/1982 | 5-11 | 175 | L | L | Ind | | Rowan University |
| 43 | 1305 | June-Reg | Michael Meagher | | lhp | 20 | 9/24/1984 | 6-3 | 230 | L | L | A- | | University of Maryland |
| 44 | 1334 | June-Reg | Blake King | | rhp | 18 | 4/11/1987 | 6-0 | 195 | R | R | A | | Bishop Kelley High School (Tulsa,OK) |
| 45 | 1363 | June-Reg | Kevin Fitzgerald | | RHP | 21 | 11/27/1983 | 6-3 | 225 | R | R | Ind | | Stony Brook University |
| 46 | 1392 | June-Reg | Danny Feldman | | RHP | 18 | 12/18/1986 | 6-7 | 238 | R | R | - | | Gloucester Catholic High School (Gloucester,NJ) |
| 47 | 1420 | June-Reg | Adam Morris | | 3b | 22 | 12/1/1982 | 6-3 | 190 | R | R | A- | | Rice University |
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