| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 11 | June-Reg | Neil Walker | $$ | C | 18 | 9/10/1985 | 6-3 | 205 | B | R | AAA | | Pine-Richland High School (Gibsonia,PA) |
| 2 | 52 | June-Reg | Brian Bixler | $$ | SS | 21 | 10/22/1982 | 6-1 | 188 | R | R | MLB | 2008-2008 | Eastern Michigan University |
| 3 | 82 | June-Reg | Eddie Prasch | $$ | 3B | 18 | 1/25/1986 | 6-1 | 180 | L | R | A+ | | Milton High School (Alpharetta,GA) |
| 4 | 112 | June-Reg | Joe Bauserman | | P | 18 | 10/4/1985 | 6-2 | 220 | R | R | A | | Lincoln High School (Tallahassee,FL) |
| 5 | 142 | June-Reg | Kyle Bloom | | P | 21 | 2/21/1983 | 6-4 | 180 | R | L | AA | | Illinois State University |
| 6 | 172 | June-Reg | A.J. Johnson | | OF | 20 | 9/26/1983 | 6-1 | 190 | R | R | A | | Tallahassee Community College |
| 7 | 202 | June-Reg | Jason Quarles | | P | 21 | 4/20/1983 | 6-0 | 195 | R | R | A | | Southern University |
| 8 | 232 | June-Reg | Eric Ridener | | P | 18 | 9/11/1985 | 6-5 | 230 | R | R | Rookie | | Taravella High School (Coral Springs,FL) |
| 9 | 262 | June-Reg | Christopher Covington | | OF | 18 | 12/12/1985 | 5-11 | 190 | R | R | Rookie | | Brookwood High School (Snellville,GA) |
| 10 | 292 | June-Reg | Derek Hankins | | P | 20 | 7/1/1983 | 6-4 | 190 | R | R | AA | | University of Memphis |
| 11 | 322 | June-Reg | Matt Guillory | | P | 21 | 3/13/1983 | 6-4 | 175 | R | R | A+ | | University of Louisiana-Monroe |
| 12 | 352 | June-Reg | J.P. Padron | | 3B | 18 | 2/14/1986 | 6-1 | 220 | R | R | College | | Clear Creek High School (League City,TX) |
| 13 | 382 | June-Reg | Brett Grandstrand | | 2B | 21 | 11/13/1982 | 6-0 | 175 | R | R | A | | Coastal Carolina University |
| 14 | 412 | June-Reg | Jermel Lomack | | 2B | 21 | 5/13/1983 | 5-8 | 160 | B | R | A | | Prairie View A&M University |
| 15 | 442** | June-Reg | John Slone | | C | | | | | | | College | | Miami University (Ohio) |
| 16 | 472 | June-Reg | Ryan Herbort | | P | 18 | 3/13/1986 | 6-2 | 200 | R | R | Rookie | | Northwest Whitfield High School (Tunnel Hill,GA) |
| 17 | 502 | June-Reg | Matt Bishop | | P | 22 | 6/2/1982 | 6-2 | 215 | R | R | A+ | | East Carolina University |
| 18 | 532 | June-Reg | Cory Luebke | | P | 19 | 3/4/1985 | 6-4 | 200 | R | L | A+ | | Marion Catholic High School (Marion,OH) |
| 19 | 562 | June-Reg | Brad Clapp | | P | 18 | 5/19/1986 | 6-4 | 215 | R | R | A | | Juanita High School (Kirkland,WA) |
| 20 | 592 | June-Reg | Brandon Reddinger | | C | 21 | 8/16/1982 | 6-2 | 210 | R | R | A | | Washington State University |
| 21 | 622 | June-Reg | Derek Drage | | P | 22 | 12/10/1981 | 6-3 | 200 | R | R | A+ | | Southwest Missouri State University |
| 22 | 652 | June-Reg | Mike Hofius | | 1B | 22 | 5/3/1982 | 6-2 | 210 | L | L | A | | Long Beach State University |
| 23 | 682 | June-Reg | Dustin Craig | | P | 22 | 4/9/1982 | 6-4 | 240 | R | R | A+ | | Sam Houston State University |
| 24 | 712 | June-Reg | Joe Salas | | P | 22 | 11/24/1981 | 5-10 | 200 | L | L | A- | | University of New Mexico |
| 25 | 742 | June-Reg | Kevin Miller | | P | 22 | 3/17/1982 | 6-3 | 220 | R | R | A- | | Bucknell University |
| 26 | 772 | June-Reg | Jason Tweedy | | SS | 17 | 9/29/1986 | 5-11 | 188 | L | R | College | | Newark Memorial High School (Newark,CA) |
| 27 | 802 | June-Reg | Scott Loeffler | | C | | | | | | | - | | Lake City Community College |
| 28 | 832 | June-Reg | Pat McAnaney | | P | 18 | 3/11/1986 | 6-3 | 200 | R | L | College | | Westhill High School (Syracuse,NY) |
| 29 | 862 | June-Reg | Christian Romple | | C | 19 | 11/12/1984 | 6-3 | 195 | R | R | - | | Big Bend Community College (WA) |
| 30 | 892 | June-Reg | Issael Gonzalez | | 2B | 17 | 8/16/1986 | 5-11 | 175 | R | R | Rookie | | Edouard Montpetit (Quebec,QC) |
| 31 | 922 | June-Reg | Oliver Marmol | | SS | 17 | 7/2/1986 | 5-10 | 165 | R | R | A+ | | Dr. Phillips High School (Orlando,FL) |
| 32 | 952 | June-Reg | Chris Palma | | P | | | | | | | - | | College of the Canyons |
| 33 | 982** | June-Reg | Justin Byler | | C | 18 | 8/12/1985 | 6-2 | 212 | R | R | A- | | Warren G. Harding High School (Warren,OH) |
| 34 | 1012** | June-Reg | Nick Beghtol | | C | | | | | | | - | | Mountain View High School (Loveland,CO) |
| 35 | 1042 | June-Reg | Jeff Robinson | | P | | | | | | | - | | Roswell High School (Roswell,GA) |
| 36 | 1072 | June-Reg | Jose Nunez | | SS | | | | | | | - | | Puerto Rico Baseball Academy High School (Gurabo,PR) |
| 37 | 1102 | June-Reg | Tim Rice | | P | 20 | 8/5/1983 | 6-2 | 200 | | L | Rookie | | University of Richmond |
| 38 | 1132 | June-Reg | Keith Pedersen | | P | | | | | | | - | | Glide High School (Glide,OR) |
| 39 | 1162 | June-Reg | Todd Redmond | | P | 19 | 5/17/1985 | 6-3 | 185 | R | R | AA | | St. Petersburg College |
| 40 | 1192 | June-Reg | Jeremy Horst | | P | 18 | 10/1/1985 | 6-4 | 225 | L | L | A | | Iowa Western Community College |
| 41 | 1222 | June-Reg | Dan Schwartzbauer | | SS | 22 | 11/2/1981 | 5-11 | 175 | R | R | A+ | | Duquesne University |
| 42 | 1251** | June-Reg | Gabe Suarez | | OF | 19 | 12/14/1984 | 6-0 | 185 | R | R | A+ | | Diablo Valley College |
| 43 | 1280 | June-Reg | Stephen Ashcraft | | OF | 18 | 9/29/1985 | 6-1 | 165 | L | L | - | | Brentwood Academy High School (Brentwood,TN) |
| 44 | 1309 | June-Reg | Sean Setzer | | 1B | | | | | | | - | | Wilson High School (Portland,OR) |
| 45 | 1338 | June-Reg | Corey Kemp | | C | 18 | 2/24/1986 | 6-0 | 225 | R | R | College | | Centennial High School (Franklin,TN) |
| 46 | 1367 | June-Reg | Josh Scofield | | P | 18 | 9/30/1985 | 6-1 | 191 | L | L | College | | Newport High School (Bellevue,WA) |
| 47 | 1396 | June-Reg | Zach Phillips | | P | | | 6-1 | 178 | | | - | | Lee County High School (Sanford,NC) |
| 48 | 1425 | June-Reg | Rick Rivas | | P | 20 | 2/12/1984 | 6-1 | 180 | R | R | College | | El Paso Community College |
| 49 | 1453 | June-Reg | Patrick Wandtke | | P | | | | | | | - | | West Orange High School (Winter Garden,FL) |
| 50 | 1481 | June-Reg | Brock Lindeke | | C | | | | | | | - | | Soquel High School (Soquel,CA) |
| |
