| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 28 | June-Reg | Daric Barton | $$ | C | 17 | 8/16/1985 | 5-11 | 195 | L | R | MLB | 2007-2008 | Marina High School (Huntington Beach,CA) |
| 2 | 65 | June-Reg | Stuart Pomeranz | $$ | P | 18 | 12/17/1984 | 6-7 | 220 | R | R | AA | | Houston High School (Germantown,TN) |
| 3 | 95 | June-Reg | Dennis Dove | $$ | P | 21 | 8/31/1981 | 6-4 | 200 | R | R | MLB | 2007-2007 | Georgia Southern University |
| 4 | 125 | June-Reg | Mark Michael | | P | 20 | 8/25/1982 | 6-5 | 210 | R | R | A+ | | University of Delaware |
| 5 | 155 | June-Reg | Brandon Yarbrough | | C | 18 | 11/9/1984 | 6-2 | 175 | L | R | AA | | Richmond High School (Rockingham,NC) |
| 6 | 185 | June-Reg | Matt Weagle | | P | 20 | 7/11/1982 | 6-3 | 200 | R | R | Ind | | Franklin Pierce College |
| 7 | 215 | June-Reg | Brendan Ryan | | SS | | | | | | | College | | Lewis-Clark State College |
| 8 | 245 | June-Reg | Matt Pagnozzi | | C | 20 | 11/10/1982 | 6-3 | 200 | R | R | AAA | | Central Arizona College |
| 9 | 275 | June-Reg | Justin Garza | | P | 20 | 7/13/1982 | 6-0 | 185 | R | R | AA | | Seminole State College |
| 10 | 305 | June-Reg | Tom Blair | | P | 21 | 7/8/1981 | 6-1 | 200 | L | L | AA | | University of Oklahoma |
| 11 | 335 | June-Reg | Nate Kopszywa | | P | 21 | 12/14/1981 | 6-6 | 230 | R | R | Rookie | | Crichton College |
| 12 | 365 | June-Reg | Calvin Beamon | | OF | 19 | 5/8/1984 | 6-1 | 190 | L | L | A | | Community College of Southern Nevada |
| 13 | 395 | June-Reg | Kainoa Obrey | | 3B | 22 | 10/6/1980 | 6-2 | 225 | R | R | A- | | Brigham Young University |
| 14 | 425** | June-Reg | Ian Kennedy | | P | 18 | 12/19/1984 | 5-11 | 185 | R | R | MLB | 2007-2008 | La Quinta High School (Westminster,CA) |
| 15 | 455 | June-Reg | Anthony Reyes | | P | 21 | 10/16/1981 | 6-2 | 215 | R | R | MLB | 2005-2008 | USC |
| 16 | 485 | June-Reg | Omar Pena | | SS | 21 | 3/2/1982 | 5-10 | 165 | R | R | A+ | | Northeastern University |
| 17 | 515 | June-Reg | Kevin House | | OF | 20 | 7/27/1982 | 5-11 | 195 | R | R | A- | | University of Memphis |
| 18 | 545 | June-Reg | Jose Virgil | | OF | 22 | 3/28/1981 | 5-11 | 215 | B | R | A- | | Oklahoma State University |
| 19 | 575 | June-Reg | Jason Motte | | C | 21 | 6/22/1982 | 6-0 | 200 | R | R | AAA | | Iona College |
| 20 | 605 | June-Reg | Jordan Pals | | P | 22 | 10/18/1980 | 6-8 | 205 | R | R | AA | | Eastern Illinois University |
| 21 | 635 | June-Reg | Jason Burch | | P | 20 | 10/15/1982 | 6-5 | 200 | R | R | AA | | University of Nebraska |
| 22 | 665** | June-Reg | Derik Drewett | | P | 18 | 2/16/1985 | 6-5 | 185 | R | R | College | | Watson Chapel High School (Pine Bluff,AR) |
| 23 | 695 | June-Reg | Matt Blanton | | P | 22 | 5/10/1981 | 6-4 | 210 | L | L | A- | | Hendrix College |
| 24 | 725 | June-Reg | Tee Thomas | | 2B | 22 | 6/13/1981 | 5-11 | 185 | R | R | A- | | Mississippi Valley State University |
| 25 | 755 | June-Reg | Tavaris Gary | | OF | 21 | 3/6/1982 | 6-1 | 185 | L | L | Rookie | | Cumberland University (Tenn.) |
| 26 | 785 | June-Reg | Levi Webber | | OF | 21 | 2/27/1982 | 6-5 | 225 | R | R | A- | | Oregon State University |
| 27 | 815 | June-Reg | Jason John | | P | 21 | 11/3/1981 | 6-5 | 240 | R | R | A- | | Grayson County Junior College |
| 28 | 845 | June-Reg | Tanner Wootan | | 2B | 20 | 10/14/1982 | 6-1 | 190 | B | R | A- | | Chandler-Gilbert Community College |
| 29 | 875 | June-Reg | Brantley Jordan | | P | 22 | 4/24/1981 | 6-0 | 195 | L | L | AA | | University of Texas |
| 30 | 905** | June-Reg | Matt Lane | | P | 18 | 8/17/1984 | 6-8 | 225 | R | R | A | | Iowa Western Community College |
| 31 | 935 | June-Reg | Mike Tamulionis | | P | 22 | 8/10/1980 | 6-1 | 175 | R | R | A- | | St. John's University |
| 32 | 965 | June-Reg | Derek Roper | | P | 22 | 12/31/1980 | 6-6 | 200 | R | R | A | | University of Missouri |
| 33 | 995 | June-Reg | Casey Grimm | | OF | 22 | 2/9/1981 | 6-0 | 210 | L | R | A- | | Seton Hall University |
| 34 | 1025 | June-Reg | Kevin Mulvey | | P | 18 | 5/26/1985 | 6-1 | 170 | R | R | AAA | | Bishop Ahr High School (Edison,NJ) |
| 35 | 1055 | June-Reg | Peter Eberhardt | | P | 21 | 10/30/1981 | 6-3 | 215 | R | R | A- | | Cerritos College |
| 36 | 1085 | June-Reg | John Powell | | P | 18 | 7/30/1984 | 6-5 | 201 | R | R | Rookie | | Carl Albert State College |
| 37 | 1115 | June-Reg | Sal Frisella | | OF | 22 | 4/10/1981 | 6-0 | 220 | R | R | A | | Southern Illinois University |
| 38 | 1145 | June-Reg | Brent Sinkbeil | | P | 18 | 12/26/1984 | 6-3 | 170 | R | R | - | | Charles Page High School (Sand Springs,OK) |
| 39 | 1175 | June-Reg | Thomas Brewer | | P | 18 | 8/30/1984 | 6-2 | 190 | R | R | A | | Bloomington South High School (Bloomington,IN) |
| 40 | 1205 | June-Reg | Peter Soteropoulos | | P | 21 | 8/5/1981 | 6-1 | 210 | L | L | A | | University of Connecticut |
| 41 | 1234** | June-Reg | Ryan Castellanos | | 3B | 18 | 11/12/1984 | 6-1 | 210 | R | R | College | | Silverado High School (Las Vegas,NV) |
| 42 | 1263 | June-Reg | Roydrick Merritt | | OF | 17 | 9/22/1985 | 6-0 | 187 | L | L | A+ | | Nimitz High School (Houston,TX) |
| 43 | 1291 | June-Reg | Max Scherzer | | P | 18 | 7/27/1984 | 6-3 | 190 | R | R | MLB | 2008-2008 | Parkway Central High School (Chesterfield,MO) |
| 44 | 1319 | June-Reg | Ryan Reichelderfer | | 1B | 19 | 11/16/1983 | 6-6 | 225 | R | R | - | | Arkansas-Fort Smith Junior College |
| 45 | 1346 | June-Reg | Josh Markham | | P | 18 | 11/19/1984 | 6-2 | 185 | L | L | Rookie | | Riverdale High School (Murfreesboro,TN) |
| 46 | 1373 | June-Reg | Kam Mickolio | | P | 19 | 5/10/1984 | 6-9 | 256 | R | R | AAA | | Eastern Utah Community College |
| 47 | 1400 | June-Reg | Tobirus Bell | | OF | 19 | 11/9/1983 | 5-9 | 170 | R | R | - | | John Wood Community College |
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