| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 28 | June-Reg | Justin Pope | $$ | P | 21 | 11/8/1979 | 6-0 | 185 | B | R | AAA | | University of Central Florida |
| 2 | 72 | June-Reg | Dan Haren | $$ | P | 20 | 9/17/1980 | 6-5 | 220 | R | R | MLB | 2003-2007 | Pepperdine University |
| 3 | 104 | June-Reg | Joe Mather | | 3B | 18 | 7/23/1982 | 6-5 | 225 | R | R | AAA | | Mountain Pointe High School (Phoenix,AZ) |
| 4 | 134 | June-Reg | Josh Brey | | P | 21 | 8/26/1979 | 6-0 | 185 | R | L | A+ | | Liberty University |
| 5 | 164 | June-Reg | Skip Schumaker | | OF | 21 | 2/3/1980 | 5-10 | 175 | L | R | MLB | 2005-2007 | University of California-Santa Barbara |
| 6 | 194 | June-Reg | John Killalea | | P | 18 | 2/23/1983 | 6-1 | 200 | L | L | Rookie | | Seminole High School (Seminole,FL) |
| 7 | 224 | June-Reg | Tyler Adamczyk | | P | 18 | 11/9/1982 | 6-6 | 190 | R | R | A+ | | Westlake High School (Westlake Village,CA) |
| 8 | 254 | June-Reg | John Nelson | | IF | 22 | 3/3/1979 | 6-1 | 190 | R | R | MLB | 2006-2006 | University of Kansas |
| 9 | 284 | June-Reg | Rhett Parrott | | P | 21 | 11/12/1979 | 6-2 | 180 | R | R | AAA | | Georgia Tech |
| 10 | 314 | June-Reg | Seth Davidson | | IF | 22 | 2/26/1979 | 6-0 | 170 | B | R | AA | | USC |
| 11 | 344 | June-Reg | Jesse Roman | | OF | 22 | 4/21/1979 | 6-0 | 190 | L | L | AA | | Rice University |
| 12 | 374 | June-Reg | Ben Julianel | | P | 21 | 9/4/1979 | 6-2 | 180 | B | L | AAA | | San Diego State University |
| 13 | 404 | June-Reg | Chris Netwall | | C | 21 | 11/17/1979 | 6-1 | 200 | R | R | AA | | Penn State University |
| 14 | 434 | June-Reg | Jordan Robinson | | OF | | | | 0 | | | College | | Northwestern State University |
| 15 | 464 | June-Reg | Matt Williams | | 3B | 22 | 3/24/1979 | 6-1 | 210 | R | R | A+ | | Baylor University |
| 16 | 494 | June-Reg | Mike Wodnicki | | P | 21 | 1/17/1980 | 6-3 | 210 | R | R | AA | | Stanford University |
| 17 | 524 | June-Reg | Josh Merrigan | | P | 23 | 6/30/1978 | 6-4 | 225 | L | L | A+ | | Oklahoma State University |
| 18 | 554 | June-Reg | Neil Simoneaux | | SS | 21 | 3/16/1980 | 6-1 | 185 | R | R | A | | University of Louisiana-Lafayette |
| 19 | 584** | June-Reg | Shane Komine | | P | 20 | 10/18/1980 | 5-8 | 160 | R | R | MLB | 2006-2007 | University of Nebraska |
| 20 | 614** | June-Reg | Bryce Kartler | | P | 21 | 6/9/1980 | 6-2 | 200 | L | L | A+ | | Arizona State University |
| 21 | 644 | June-Reg | Cody Gunn | | C | 19 | 3/9/1982 | 6-0 | 180 | L | R | Rookie | | Brewster High School (Brewster,WA) |
| 22 | 674 | June-Reg | Bryan Moore | | 1B | 21 | 3/20/1980 | 6-2 | 225 | L | L | A | | Louisiana State University |
| 23 | 704** | June-Reg | Kevin Correia | | P | 20 | 8/24/1980 | 6-3 | 180 | R | R | MLB | 2003-2007 | Cal Poly |
| 24 | 734 | June-Reg | Myles Ledbetter | | P | 20 | 6/28/1981 | 6-5 | 210 | R | R | - | | Westark Community College |
| 25 | 764 | June-Reg | Dan Kantrovitz | | | 22 | 9/8/1978 | 5-8 | 180 | R | R | Rookie | | Brown University |
| 26 | 794 | June-Reg | Aaron Russelburg | | P | 21 | 10/17/1979 | 6-4 | 215 | R | R | A+ | | Murray State University |
| 27 | 824** | June-Reg | Lee Gwaltney | | P | 21 | 5/6/1980 | 6-6 | 215 | R | R | AA | | Louisiana Tech University |
| 28 | 854 | June-Reg | Blake Hawksworth | | P | 18 | 3/1/1983 | 6-3 | 190 | R | R | AAA | | Eastlake High School (Sammamish,WA) |
| 29 | 884 | June-Reg | Pilar Amaya | | | 21 | 3/29/1980 | 6-3 | 190 | B | R | Rookie | | San Diego State University |
| 30 | 914 | June-Reg | Jeffrey Jones | | OF | | | | 0 | | | A- | | Long Beach State University |
| 31 | 944 | June-Reg | Marcus Markray | | P | 18 | 2/5/1983 | 6-4 | 180 | L | L | College | - | Springhill High School (Springhill,LA) |
| 32 | 974 | June-Reg | Andrew Davie | | 1B | 18 | 1/5/1983 | 6-6 | 240 | L | R | A- | | Central Arkansas Christian High School (North Little Rock,AR) |
| 33 | 1004** | June-Reg | Jake Nowlen | | P | 20 | 9/8/1980 | 6-2 | 190 | R | R | Rookie | | University of Arkansas, Monticello |
| 34 | 1034 | June-Reg | Matt Pearl | | | 22 | 9/8/1978 | 6-0 | 190 | R | R | A- | | Cal State Bakersfield |
| 35 | 1064 | June-Reg | Mike Cust | | | 18 | 3/19/1983 | 5-10 | 205 | R | R | College | | Immaculata High School (Somerville,NJ) |
| 36 | 1094** | June-Reg | Billy Biggs | | P | 21 | 9/9/1979 | 6-1 | 195 | R | R | AA | | West Virginia University |
| 37 | 1124 | June-Reg | Richard Quihuis-Bell | | | 19 | 9/22/1981 | 6-5 | 220 | L | L | Ind | | Central Arizona College |
| 38 | 1154 | June-Reg | Jared Blasdell | | P | 22 | 5/14/1979 | 6-3 | 185 | R | R | AAA | | Cal Poly |
| 39 | 1184 | June-Reg | Dan Shouse | | P | 22 | 9/21/1978 | 6-3 | 200 | L | L | A | | Saint Louis University |
| 40 | 1213 | June-Reg | Steve Green | | CF | 22 | 7/22/1978 | 6-1 | 180 | L | R | A+ | | University of Arkansas, Monticello |
| 41 | 1242 | June-Reg | Travis Palmer | | | 21 | 10/5/1979 | 6-3 | 190 | R | R | Rookie | | University of Utah |
| 42 | 1270 | June-Reg | Anthony Rawson | | P | 20 | 7/31/1980 | 5-11 | 180 | L | L | AAA | | University of Southern Mississippi |
| 43 | 1298 | June-Reg | Jesse Kozlowski | | P | 19 | 8/31/1981 | 6-5 | 175 | R | R | - | | Los Angeles Pierce College |
| 44 | 1326 | June-Reg | Shane Reedy | | P | 19 | 6/2/1982 | 6-2 | 200 | R | R | Rookie | | Utah Valley State College |
| 45 | 1354 | June-Reg | Billy Paganetti | | | | | | | | | Rookie | | Galena High School (Reno,NV) |
| 46 | 1382** | June-Reg | Drew Davidson | | | 19 | 5/7/1982 | 6-0 | 190 | R | R | A+ | | Dowling High School (West Des Moines,IA) |
| 47 | 1409 | June-Reg | Terry Evans | | 3B | 19 | 1/19/1982 | 6-3 | 200 | R | R | MLB | 2007-2007 | Middle Georgia College |
| 48 | 1435 | June-Reg | Mike Levy | | C | 22 | 3/11/1979 | 5-11 | 205 | R | R | Rookie | | Dartmouth College |
| 49 | 1460 | June-Reg | Samuel Fisher | | P | 20 | 9/20/1980 | 5-11 | 175 | R | R | - | | University of Dayton |
| 50 | 1483 | June-Reg | Mike Fox | | 3B | 21 | 8/13/1979 | 6-1 | 190 | R | R | A+ | | University of Central Florida |
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