| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 9 | June-Reg | Colt Griffin | $$ | P | 18 | 9/29/1982 | 6-4 | 198 | R | R | AA | | Marshall High School (Marshall,TX) |
| 2 | 53 | June-Reg | Roscoe Crosby | $$ | OF | 18 | 2/6/1983 | 6-2 | 205 | L | R | - | | Union High School (Union,SC) |
| 3 | 85 | June-Reg | Matt Ferrara | $$ | 3B | 18 | 9/27/1982 | 6-0 | 190 | R | R | A- | | Westminster Academy High School (Fort Lauderdale,FL) |
| 4 | 115 | June-Reg | John Draper | | C | 20 | 8/11/1980 | 6-2 | 190 | R | R | AA | | Cal State Los Angeles |
| 5 | 145 | June-Reg | Chamar McDonald | | OF | 18 | 6/18/1983 | 6-4 | 200 | R | R | A | | Madison (MS Central) |
| 6 | 175 | June-Reg | Clint Frost | | P | 17 | 7/4/1983 | 6-7 | 180 | R | R | Rookie | | Jordan High School (Columbus,GA) |
| 7 | 205 | June-Reg | Chris Tierney | | P | 17 | 9/1/1983 | 6-6 | 225 | L | L | A+ | | Rockport High School (Rockport,IL) |
| 8 | 235 | June-Reg | Ira Brown | | P | 18 | 8/3/1982 | 6-4 | 225 | R | R | A | | Willis High School (Willis,TX) |
| 9 | 265** | June-Reg | Justin Nelson | | P | 18 | 12/15/1982 | 6-4 | 200 | L | L | A+ | | Colorado College |
| 10 | 295 | June-Reg | Danny Tamayo | | P | 22 | 6/3/1979 | 6-1 | 215 | R | R | AAA | | University of Notre Dame |
| 11 | 325 | June-Reg | Angel Sanchez | | 2B | 17 | 9/20/1983 | 6-1 | 170 | R | R | MLB | 2006-2006 | Garcia (PR) |
| 12 | 355 | June-Reg | Victor Rosario | | OF | 20 | 12/26/1980 | 5-9 | 175 | L | R | A | - | Lake City Community College |
| 13 | 385 | June-Reg | Cedric Watkins | | OF | 18 | 5/25/1983 | 5-11 | 210 | R | R | Rookie | | Bassett High School (Bassett,VA) |
| 14 | 415 | June-Reg | Devon Lowery | | P | 18 | 3/24/1983 | 6-1 | 190 | L | R | AA | | South Point High School (Belmont,NC) |
| 15 | 445** | June-Reg | Danny Zell | | P | 19 | 11/27/1981 | 6-5 | 210 | L | L | AA | | Angelina College |
| 16 | 475 | June-Reg | Mel Stocker | | CF | 20 | 8/15/1980 | 5-10 | 160 | L | R | MLB | 2007-2007 | Arizona State University |
| 17 | 505 | June-Reg | Marcus Chandler | | CF | 21 | 7/25/1979 | 6-0 | 180 | B | R | A- | | Southern University |
| 18 | 535 | June-Reg | Alexis Alexander | | OF | 18 | 11/18/1982 | 5-11 | 215 | R | R | A | - | Medical Lake High School (Medical Lake,WA) |
| 19 | 565 | June-Reg | Mervin Williams | | OF | 17 | 9/1/1983 | 5-10 | 180 | L | R | Ind | | East St. John High School (Reserve,LA) |
| 20 | 595 | June-Reg | Peter Gunny | | CF | 21 | 5/24/1980 | 6-0 | 185 | R | R | A- | | Los Angeles Pierce College |
| 21 | 625 | June-Reg | Brian Melnyk | | P | 20 | 8/2/1980 | 6-2 | 200 | L | L | A | | Point Park College (Pa.) |
| 22 | 655 | June-Reg | Chris Fallon | | IF | 22 | 3/9/1979 | 6-2 | 190 | L | R | A+ | | St. John's University |
| 23 | 685 | June-Reg | Jermaine Johnson | | OF | | | | 0 | | | - | | Glynn Academy High School (Brunswick,GA) |
| 24 | 715 | June-Reg | J.D. Alleva | | C | 22 | 11/2/1978 | 5-11 | 195 | L | R | A+ | | Duke University |
| 25 | 745 | June-Reg | Richard Zary | | P | 23 | 6/18/1978 | 6-3 | 200 | R | R | A | | Limestone College |
| 26 | 775** | June-Reg | Derek De Carlo | | | 18 | 3/24/1983 | 6-3 | 170 | R | R | A | | Southridge High School (Miami,FL) |
| 27 | 805 | June-Reg | Derrik Lytle | | OF | 19 | 12/1/1981 | 6-2 | 180 | L | L | A+ | | Mesa Community College |
| 28 | 835 | June-Reg | Luke Palmer | | P | 18 | 5/7/1983 | 6-3 | 200 | R | R | A | | Baker High School (Baker City,OR) |
| 29 | 865** | June-Reg | Bryan Mccaulley | | P | | | | 0 | | | - | | Barbe High School (Lake Charles,LA) |
| 30 | 895** | June-Reg | Zeke Parraz | | | 18 | 9/2/1982 | 6-0 | 180 | R | R | A- | | Green Valley High School (Henderson,NV) |
| 31 | 925 | June-Reg | Jake Guzman | | C | 18 | 8/2/1982 | 6-0 | 210 | R | R | AA | | Palomar College |
| 32 | 955 | June-Reg | Julio Medina | | P | 18 | 4/25/1983 | 6-3 | 180 | R | R | A | | Elk Grove High School (Elk Grove,IL) |
| 33 | 985 | June-Reg | John Barnett | | P | 19 | 6/26/1982 | 6-0 | 195 | R | R | A- | | Arizona Western College |
| 34 | 1015 | June-Reg | Erik Dean | | IF | 19 | 2/7/1982 | 6-0 | 190 | L | R | A+ | | West Valley College |
| 35 | 1045 | June-Reg | Barry Richardson | | | | | | | | | College | | Lake City Community College |
| 36 | 1075 | June-Reg | Chris Washington | | P | | | | 0 | | | - | | Port St. Lucie High School (Port St. Lucie,FL) |
| 37 | 1105** | June-Reg | Brad Knox | | P | 19 | 5/27/1982 | 6-3 | 210 | R | R | AAA | | Blinn College |
| 38 | 1135 | June-Reg | James Dayley | | | 20 | 12/23/1980 | 6-2 | 190 | R | R | College | | Utah Valley State College |
| 39 | 1165** | June-Reg | Taylor Tankersley | | | 18 | 3/7/1983 | 6-1 | 220 | L | L | MLB | 2006-2007 | Warren Central High School (Vicksburg,MS) |
| 40 | 1195** | June-Reg | Jason Snyder | | P | 18 | 4/6/1983 | 6-5 | 185 | R | R | AAA | | Alta High School (Sandy,UT) |
| 41 | 1224 | June-Reg | Rene Pablos | | P | | | | 0 | | | A | | Cochise College |
| 42 | 1253 | June-Reg | Nick Cadena | | | 18 | 11/17/1982 | 6-1 | 185 | R | R | A+ | | Apollo High School (Glendale,AZ) |
| 43 | 1281 | June-Reg | Stephen Green | | CF | 18 | 3/16/1983 | 5-10 | 185 | R | R | - | | Moahalua High School (Honolulu,HI) |
| 44 | 1309** | June-Reg | Brady Everett | | | 17 | 7/8/1983 | 6-0 | 205 | R | R | A+ | | Federal Way High School (Federal Way,WA) |
| 45 | 1337 | June-Reg | Curtis Legendre | | 3B | 19 | 9/1/1981 | 6-0 | 190 | R | R | A- | | Angelina College |
| 46 | 1365 | June-Reg | Bret Berglund | | | 18 | 12/9/1982 | 6-4 | 210 | R | R | AAA | | Kent Denver High School (Littleton,CO) |
| 47 | 1393 | June-Reg | Caleb Irwin | | P | | | | 0 | | | - | | Temple University |
| 48 | 1420 | June-Reg | Ryan Coiner | | P | 18 | 12/3/1982 | 6-5 | 190 | R | R | - | | Las Vegas High School (Las Vegas,NV) |
| 49 | 1445** | June-Reg | Ryan Patterson | | H | 18 | 5/2/1983 | 5-11 | 205 | R | R | AA | | Rowlett High School (Rowlett,TX) |
| 50 | 1469 | June-Reg | Bo Baker | | P | 20 | 10/12/1980 | 6-4 | 190 | R | R | Rookie | | Eastern Arizona College |
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