| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 2 | 69 | June-Reg | Michael Schultz | | P | 20 | 11/28/1979 | 6-7 | 210 | R | R | MLB | 2007-2007 | Loyola Marymount University |
| 3 | 99 | June-Reg | Bill White | | P | 21 | 11/20/1978 | 6-3 | 210 | L | L | MLB | 2007-2007 | Jacksonville State University |
| 4 | 129 | June-Reg | Josh Kroeger | | OF | 17 | 8/31/1982 | 6-2 | 195 | L | L | MLB | 2004-2004 | Scripps Ranch High School (San Diego,CA) |
| 5 | 159 | June-Reg | Brad Cresse | | c | 21 | 7/31/1978 | 6-2 | 230 | R | R | AAA | | Louisiana State University |
| 6 | 189 | June-Reg | Robert Barber | | P | | | | 0 | | | - | | University of South Carolina |
| 7 | 219 | June-Reg | Tim Olson | | SS | 21 | 8/1/1978 | 6-2 | 200 | R | R | MLB | 2004-2005 | University of Florida |
| 8 | 249 | June-Reg | Brandon Webb | | P | 21 | 5/9/1979 | 6-2 | 210 | R | R | MLB | 2003-2008 | University of Kentucky |
| 9 | 279 | June-Reg | Tanner Eriksen | $$ | P | 21 | 4/13/1979 | 6-6 | 240 | R | R | A+ | | USC |
| 10 | 309 | June-Reg | Cedrick Harris | | OF | 22 | 11/14/1977 | 6-2 | 190 | R | R | AA | | Louisiana State University |
| 11 | 339 | June-Reg | Rick Haydel | | IF | 21 | 8/26/1978 | 6-1 | 185 | R | R | A | | University of Louisiana-Lafayette |
| 12 | 369 | June-Reg | Brian Bruney | | P | 18 | 2/17/1982 | 6-3 | 230 | R | R | MLB | 2004-2008 | Warrenton High School (Warrenton,OR) |
| 13 | 399 | June-Reg | Pete Sikaras | | P | 21 | 5/5/1979 | 6-2 | 210 | R | R | AAA | | University of Saint Francis (Ill.) |
| 14 | 429 | June-Reg | Jesus Cota | | IF | 18 | 11/7/1981 | 6-3 | 215 | L | R | AAA | | Pima Community College |
| 15 | 459 | June-Reg | JuJu Foreman | | OF | 21 | 2/18/1979 | 5-7 | 155 | L | R | AAA | | Augusta College |
| 16 | 489 | June-Reg | Will Rossellini | | P | 20 | 7/11/1979 | 6-2 | 205 | R | R | Rookie | | University of Dallas |
| 17 | 519 | June-Reg | Doug Slaten | | P | 20 | 2/4/1980 | 6-5 | 190 | L | L | MLB | 2006-2008 | Los Angeles Pierce College |
| 18 | 549 | June-Reg | Vince Eppolito | | P | 22 | 7/29/1977 | 6-5 | 225 | R | R | AAA | | Shippensburg University of Pennsylvania |
| 19 | 579 | June-Reg | Aric Leclair | | P | 22 | 4/12/1978 | 6-0 | 190 | L | L | AA | | Indiana State University |
| 20 | 609 | June-Reg | Christopher Lesieur | | P | 21 | 5/23/1979 | 6-1 | 190 | R | R | Rookie | | University of New Haven |
| 21 | 639 | June-Reg | Jason Williams | | | 21 | 12/6/1978 | 5-11 | 185 | R | R | AA | | University of California |
| 22 | 669 | June-Reg | Corbey Medlin | | P | 18 | 8/4/1981 | 6-3 | 190 | R | R | A+ | | Katy High School (Katy,TX) |
| 23 | 699** | June-Reg | Brett Korth | | P | 18 | 9/16/1981 | 6-4 | 200 | R | R | College | | Genoa-Kingston High School (Genoa,IL) |
| 24 | 729 | June-Reg | Andy Green | | | 22 | 7/7/1977 | 5-9 | 170 | R | R | MLB | 2004-2006 | University of Kentucky |
| 25 | 759 | June-Reg | James Gregg | | P | 21 | 11/5/1978 | 6-5 | 220 | R | R | A+ | | George C. Wallace Community College |
| 26 | 789 | June-Reg | Greg Belson | | P | 21 | 8/16/1978 | 5-10 | 170 | R | R | A+ | | Montclair State University |
| 27 | 819 | June-Reg | Jonathan Sherlock | | C | 18 | 1/15/1982 | 6-3 | 225 | R | R | Rookie | | Hopkins High School (Minnetonka,MN) |
| 28 | 849 | June-Reg | Matt Steele | | | 23 | 5/16/1977 | 6-1 | 212 | R | R | A | | University of Georgia |
| 29 | 879** | June-Reg | Ian Kinsler | | SS | 18 | 6/22/1982 | 6-0 | 175 | R | R | MLB | 2006-2008 | Canyon del Oro High School (Tucson,AZ) |
| 30 | 909** | June-Reg | Ryan Costello | | P | 20 | 7/13/1979 | 6-6 | 215 | R | L | AA | | Gloucester County College |
| 31 | 939 | June-Reg | John Massey | | C | 21 | 10/2/1978 | 6-4 | 220 | R | R | A | | University of Tennessee |
| 32 | 969 | June-Reg | Ralph Roberts | | P | 20 | 3/28/1980 | 6-2 | 208 | R | R | AA | | Lenoir-Rhyne College |
| 33 | 999 | June-Reg | Khari Council | | 1B | | | | 0 | | | - | | McClancy Memorial High School (Flushing,NY) |
| 34 | 1029 | June-Reg | Steve Woodward | | LF | 22 | 12/28/1977 | 5-11 | 200 | B | L | A+ | | California State University, Fullerton |
| 35 | 1059 | June-Reg | Joe Ricciardi | | P | 20 | 8/2/1979 | 6-2 | 200 | R | R | A | | Saint Leo University |
| 36 | 1089 | June-Reg | Joey Cramblitt | | P | 21 | 7/27/1978 | 6-3 | 235 | R | R | AA | | University of Mississippi |
| 37 | 1119 | June-Reg | Leonard Rice | | P | | | | 0 | | | AA | | Galveston College |
| 38 | 1149 | June-Reg | Oscar Mattox | | P | | | | 0 | | | - | | Phoenix College |
| 39 | 1179 | June-Reg | Brandon Simon | | OF | 19 | 9/9/1980 | 6-0 | 170 | L | L | A+ | | West Hills College |
| 40 | 1208** | June-Reg | Josh Perrault | | | 18 | 6/11/1982 | 6-3 | 205 | R | R | AAA | | Red Mountain High School (Mesa,AZ) |
| 41 | 1237 | June-Reg | Orlando Delanves | | SS | 19 | 4/16/1981 | 5-11 | 172 | R | R | Rookie | | |
| 42 | 1266 | June-Reg | Charles Parkinson | | CF | | | | 0 | | | - | | Blue Ridge High School (Lakeside,AZ) |
| 43 | 1294 | June-Reg | Carlton Wells | | P | 20 | 3/26/1980 | 6-2 | 210 | L | L | AA | | Hillsborough Community College |
| 44 | 1320 | June-Reg | Marques Chilsom | | LF | 18 | 3/6/1982 | 5-11 | 190 | R | R | Rookie | | |
| 45 | 1346** | June-Reg | Rob Ramsey | | P | 18 | 9/26/1981 | 6-2 | 180 | R | R | A | | Bowie High School (Austin,TX) |
| 46 | 1370 | June-Reg | Luis Trinidad | | P | | | | 0 | | | - | | Long Beach City College |
| 47 | 1391** | June-Reg | Andrew Wishy | | OF | 17 | 9/27/1982 | 6-3 | 210 | L | R | A | | Raytown South High School (Raytown,MO) |
| 48 | 1411 | June-Reg | Creighton Kahoali | | | | | | | | | College | | Newark Memorial High School (Newark,CA) |
| 49 | 1431 | June-Reg | Eric Anderson | | | | | | | | | College | | Lake Dallas High School (Corinth,TX) |
| 50 | 1451** | June-Reg | Brian Buscher | | 3B | 19 | 4/18/1981 | 6-0 | 185 | L | R | MLB | 2007-2008 | Central Florida Community College |
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