| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 15 | June-Reg | Jason Stumm | $$ | P | 18 | 4/13/1981 | 6-2 | 215 | R | R | AA | | Centralia High School (Centralia,WA) |
| 1 | 22 | June-Reg | Matt Ginter | $$ | P | 21 | 12/24/1977 | 6-1 | 220 | R | R | MLB | 2000-2005 | Mississippi State University |
| 1 | 35 | June-Reg | Brian West | $$ | P | 18 | 8/4/1980 | 6-4 | 230 | R | R | AAA | | West Monroe High School (West Monroe,LA) |
| 1 | 45 | June-Reg | Rob Purvis | $$ | P | 21 | 8/11/1977 | 6-2 | 200 | R | R | AAA | | Bradley University |
| 2 | 64 | June-Reg | Jonathan Wright | | P | 20 | 2/14/1979 | 6-1 | 200 | R | R | Ind | | University of Arkansas |
| 2 | 66** | June-Reg | Bobby Hill | | 2B | 21 | 4/3/1978 | 5-10 | 170 | B | R | MLB | 2002-2005 | University of Miami (Florida) |
| 3 | 99 | June-Reg | Jon Rauch | | P | 20 | 9/27/1978 | 6-11 | 255 | R | R | MLB | 2002-2008 | Morehead State University |
| 4 | 129** | June-Reg | Brandon Sloan | | P | 21 | 10/26/1977 | 6-2 | 190 | B | R | AAA | | Wichita State University |
| 5 | 159 | June-Reg | Josh Stewart | | P | 20 | 12/5/1978 | 6-3 | 205 | L | L | MLB | 2003-2004 | University of Memphis |
| 6 | 189** | June-Reg | Dave Sanders | | P | 19 | 8/29/1979 | 6-0 | 200 | L | L | MLB | 2003-2005 | Barton County Community College |
| 7 | 219 | June-Reg | Mike Patten | | P | | | | 0 | | | Rookie | | Tecumseh High School (Tecumseh,OK) |
| 8 | 249 | June-Reg | Dennis Ulacia | | P | 18 | 4/2/1981 | 6-1 | 185 | L | L | AAA | | Monsignor Pace High School (Miami,FL) |
| 9 | 279 | June-Reg | Corwin Malone | | P | 18 | 7/3/1980 | 6-3 | 200 | R | L | AAA | | Thomasville High School (Thomasville,AL) |
| 10 | 309 | June-Reg | Matt Guerrier | | P | 20 | 8/2/1978 | 6-3 | 185 | R | R | MLB | 2004-2008 | Kent State University |
| 11 | 339 | June-Reg | Alec Holifield | | P | | | | 0 | | | - | | Stranahan High School (Fort Lauderdale,FL) |
| 12 | 369 | June-Reg | Derek Stanley | | CF | | | | 0 | | | Rookie | | North Florida Community College |
| 13 | 399 | June-Reg | Casey Rogowski | | 1B | 18 | 5/1/1981 | 6-2 | 234 | L | L | AAA | | Catholic Central High School (Novi,MI) |
| 14 | 429 | June-Reg | Spencer Oborn | | OF | 21 | 8/22/1977 | 6-3 | 190 | R | R | A+ | - | California State University, Fullerton |
| 15 | 459 | June-Reg | Julio Reyes | | OF | 19 | 6/30/1980 | 6-2 | 185 | L | R | A | | Miami Senior High School (Miami,FL) |
| 16 | 489** | June-Reg | Ben Birk | | P | 21 | 11/6/1977 | 6-5 | 210 | L | L | Rookie | | University of Minnesota |
| 17 | 519** | June-Reg | Ryan Childs | | 3B-P | 17 | 8/16/1981 | 6-3 | 210 | L | R | AAA | | Damascus High School (Damascus,MD) |
| 18 | 549** | June-Reg | Scott Hairston | | IF | 19 | 5/25/1980 | 6-0 | 190 | R | R | MLB | 2004-2008 | Canyon del Oro High School (Tucson,AZ) |
| 19 | 579 | June-Reg | Mike Done | | P | 19 | 7/27/1979 | 5-11 | 190 | B | R | AAA | | Monsignor Pace High School (Miami,FL) |
| 20 | 609** | June-Reg | David Brockman | | P | 19 | 6/14/1980 | 6-1 | 210 | R | R | A- | | Glendale Community College (CA) |
| 21 | 639 | June-Reg | Dan Martinez | | P | 20 | 12/31/1978 | 6-6 | 235 | L | L | A | | Southwestern Junior College |
| 22 | 669 | June-Reg | Kris McWhirter | | P | 20 | 5/11/1979 | 6-4 | 195 | L | R | AAA | | Volunteer State Community College |
| 23 | 699 | June-Reg | Joe Curreri | | P | 22 | 6/29/1977 | 6-1 | 195 | R | R | AAA | | Long Island University-Brooklyn Campus |
| 24 | 729 | June-Reg | Todd Holt | | LF | | | | 0 | | | Rookie | | Louisburg College |
| 25 | 759 | June-Reg | Rocky Hughes | | P | 20 | 4/29/1979 | 6-0 | 150 | L | L | A+ | | Pratt Community College |
| 26 | 789 | June-Reg | Joe Valentine | | P | 19 | 12/24/1979 | 6-2 | 190 | R | R | MLB | 2003-2005 | Jefferson Davis Community College |
| 27 | 819** | June-Reg | Daniel Ortmeier | | OF | 18 | 5/11/1981 | 6-4 | 225 | B | R | MLB | 2005-2008 | Lewisville High School (Highland Village,TX) |
| 28 | 849 | June-Reg | Wally Rosa | | C | 17 | 11/28/1981 | 6-1 | 185 | R | R | AAA | | Brito Private High School (Miami,FL) |
| 29 | 879 | June-Reg | Jason Rummel | | 2B | 22 | 7/21/1976 | 5-10 | 180 | R | R | Rookie | | Towson University |
| 30 | 909 | June-Reg | Jonathan Cavin | | OF | 19 | 3/19/1980 | 6-3 | 220 | L | R | A+ | | Connors State College |
| 31 | 939 | June-Reg | Juan Gutierrez | | OF | 17 | 8/1/1981 | 6-0 | 190 | B | R | AA | | Coral Park High School (Miami,FL) |
| 32 | 969 | June-Reg | Michel Valdez | | OF | | | | 0 | | | - | | Miami-Dade College |
| 33 | 999** | June-Reg | Tony Neal | | P | 18 | 9/12/1980 | 6-2 | 205 | R | R | A+ | | Faulkner State Community College |
| 34 | 1029 | June-Reg | Matthew Salvesen | | 3B | 19 | 11/18/1979 | 6-3 | 225 | L | R | Rookie | | Kishwaukee Community College |
| 35 | 1059 | June-Reg | Greg Sandifer | | P | | | | 0 | | | - | | Palomar College |
| 36 | 1089 | June-Reg | Jeff Bajenaru | | P | 21 | 3/21/1978 | 6-1 | 190 | R | R | MLB | 2004-2006 | University of Oklahoma |
| 37 | 1119 | June-Reg | Kade Eady | | | 18 | 4/7/1981 | 6-1 | 200 | R | R | College | | West Ouachita High School (West Monroe,LA) |
| 38 | 1149 | June-Reg | Trent Roehler | | C | 22 | 10/28/1976 | 6-3 | 230 | R | R | Rookie | | Fort Hays State University |
| 39 | 1179 | June-Reg | Paul Beaudreau | | C | | | | 0 | | | - | | El Modena High School (Orange,CA) |
| 40 | 1209 | June-Reg | Jeremy Castillo | | OF | | | | 0 | | | - | | Southridge High School (Miami,FL) |
| 41 | 1239 | June-Reg | Eric Johnson | | P | | | | 0 | | | - | | Southridge High School (Miami,FL) |
| 42 | 1267 | June-Reg | John Koonig | | P | | | | 0 | | | - | | Jefferson College |
| 43 | 1294 | June-Reg | Kris Gross | | | 18 | 12/28/1980 | 6-2 | 185 | R | R | A+ | | Lee's Summit High School (Lee's Summit,MO) |
| 44 | 1321** | June-Reg | Armando Perez | | P | 18 | 12/26/1980 | 6-2 | 190 | L | L | A | | Montgomery High School (San Diego,CA) |
| 45 | 1346** | June-Reg | James Hymon | | SS | 19 | 4/22/1980 | 6-0 | 170 | R | R | Ind | | Kishwaukee Community College |
| 46 | 1370** | June-Reg | Dustin Scheffel | | P | 18 | 5/6/1981 | 6-5 | 200 | R | R | A | | Oak Ridge High School (El Dorado Hills,CA) |
| 47 | 1394 | June-Reg | Carlynn Steele | | SS | | | | 0 | | | - | | Connors State College |
| 48 | 1418** | June-Reg | Mike Cox | | 3B | 18 | 11/11/1980 | 6-1 | 185 | R | R | AA | | Riverview High School (Sarasota,FL) |
| 49 | 1441 | June-Reg | Austin Rappe | | CF | | | | 0 | | | - | | Virginia Tech |
| 50 | 1463 | June-Reg | Adam Heiden | | P | | | | 0 | | | - | | Denison High School (Denison,IA) |
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