| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 13 | June-Reg | Kyle Peterson | $$ | P | 21 | 4/9/1976 | 6-3 | 220 | L | R | MLB | 1999-2001 | Stanford University |
| 2 | 65 | June-Reg | Alvin Morrow | | OF | 19 | 4/28/1978 | 6-4 | 240 | R | R | A+ | | Kirkwood High School (Kirkwood,MO) |
| 3 | 97 | June-Reg | Jeff Deardorff | | 3B | 18 | 8/14/1978 | 6-3 | 220 | R | R | AAA | | South Lake High School (Groveland,FL) |
| 4 | 127 | June-Reg | Tommy Warren | | OF | 17 | 11/1/1979 | 6-4 | 180 | B | R | Rookie | | Westchester High School (Los Angeles,CA) |
| 5 | 157 | June-Reg | Frank Candela | | OF | | | | | | | A | | Peabody High School (Peabody,MA) |
| 6 | 187 | June-Reg | Jake Eye | | P | 22 | 12/28/1974 | 6-1 | 205 | R | R | Rookie | | Ohio University |
| 7 | 217 | June-Reg | Bucky Jacobsen | | OF | 21 | 8/30/1975 | 6-4 | 220 | R | R | MLB | 2004-2004 | Lewis-Clark State College |
| 8 | 247 | June-Reg | Todd Incantalupo | | P | 21 | 5/18/1976 | 6-2 | 185 | L | L | A | | Providence College |
| 9 | 277 | June-Reg | Matt Childers | | P | 18 | 12/3/1978 | 6-5 | 195 | R | R | MLB | 2002-2005 | Westside High School (Augusta,GA) |
| 10 | 307 | June-Reg | Chris Patton | | SS | | | | | | | - | | McClintock High School (Tempe,AZ) |
| 11 | 337 | June-Reg | Jim Miller | | P | 21 | 8/1/1975 | 6-6 | 195 | B | R | A+ | | Carthage College |
| 12 | 367 | June-Reg | Kendal Guthrie | | C | 21 | 11/29/1975 | 6-1 | 195 | R | R | Rookie | | Northwood Institute (TX) |
| 13 | 397 | June-Reg | Brent Kelley | | p | 21 | 3/28/1976 | 6-1 | 175 | R | R | Rookie | | Arkansas State University |
| 14 | 427 | June-Reg | Chris Rowan | | 3B | 18 | 3/18/1979 | 6-1 | 175 | R | R | A+ | | Mount Vernon High School (Mount Vernon,NY) |
| 15 | 457 | June-Reg | Romaro Miller | | SS | | | | | | | - | | Shannon High School (Shannon,MS) |
| 16 | 487 | June-Reg | Andy Cavanagh | | p | 20 | 5/3/1977 | 6-3 | 210 | R | R | Rookie | | Young Harris College |
| 17 | 517 | June-Reg | Mark Kirst | | p | 22 | 5/23/1975 | 6-4 | 200 | R | R | A+ | | St Norbert's College (WI) |
| 18 | 547 | June-Reg | Jay Akin | | p | 22 | 7/9/1974 | 6-2 | 200 | L | L | AA | | Arkansas State University |
| 19 | 577 | June-Reg | Shane Wooten | | p | 22 | 3/14/1975 | 6-0 | 170 | B | L | A | | Birmingham-Southern College |
| 20 | 607** | June-Reg | Doug Clark | | OF | 21 | 3/5/1976 | 6-2 | 200 | L | R | MLB | 2005-2006 | University of Massachusetts |
| 21 | 637 | June-Reg | Mark Cridland | | OF | 22 | 5/15/1975 | 6-3 | 205 | L | R | AA | | University of Texas |
| 22 | 667** | June-Reg | Charlie Manning | | p | 18 | 3/31/1979 | 6-2 | 180 | L | L | MLB | 2008-2008 | Winter Haven High School (Winter Haven,FL) |
| 23 | 697 | June-Reg | Kevin Priebe | | p | 22 | 1/1/1975 | 6-2 | 225 | R | L | AA | | Bradley University |
| 24 | 727 | June-Reg | Robbie Baker | | p | | | | | | | - | | Blinn College |
| 25 | 757 | June-Reg | Steve Beller | | p | 22 | 10/29/1974 | 6-4 | 235 | R | R | - | | West Virginia University |
| 26 | 787 | June-Reg | Trad Sokol | | p | 20 | 5/12/1977 | 6-1 | 185 | R | L | Rookie | | Frederick Community College |
| 27 | 817 | June-Reg | Brian Mallette | | p | 22 | 1/19/1975 | 6-0 | 185 | R | R | MLB | 2002-2002 | Columbus College |
| 28 | 847 | June-Reg | Marty Patterson | | C | 22 | 12/24/1974 | 6-2 | 200 | R | R | Rookie | | Michigan State University |
| 29 | 877** | June-Reg | Al Corbeil | | C | 18 | 12/16/1978 | 6-0 | 190 | L | R | A+ | | Plantation High School (Plantation,FL) |
| 30 | 907 | June-Reg | Brian Fields | | p | 22 | 8/21/1974 | 6-1 | 175 | R | L | A+ | | East Carolina University |
| 31 | 937 | June-Reg | Chauncey Jones | | p | 21 | 9/15/1975 | 6-1 | 195 | R | R | Rookie | | Briarcliffe College |
| 32 | 967 | June-Reg | Gary McConnell | | p | 19 | 5/6/1978 | 6-3 | 190 | R | R | Rookie | | North Florida Community College |
| 33 | 997 | June-Reg | Arthur Garland | | p | | | | 0 | | | - | | Magnolia High School (Anaheim,CA) |
| 34 | 1027 | June-Reg | James Igo | | p | | | | | | | - | | Galveston College |
| 35 | 1057** | June-Reg | Ryan Costello | | p | 17 | 7/13/1979 | 6-6 | 215 | R | L | AA | | Eastern High School (Voorhees,NJ) |
| 36 | 1087 | June-Reg | Chad Helmer | | p | 21 | 9/12/1975 | 6-4 | 195 | R | R | AA | | Florida Southern College |
| 37 | 1117** | June-Reg | Landon Jacobsen | | p | 18 | 5/4/1979 | 6-3 | 203 | R | R | AAA | | Howard High School (Canova,SD) |
| 38 | 1147 | June-Reg | Randy Rodriguez | | | | | | | | | - | | Indian River Community College |
| 39 | 1177 | June-Reg | Joel Arroyo | | p | 20 | 7/16/1976 | 6-0 | 208 | R | R | Rookie | | Saint Leo University |
| 40 | 1207 | June-Reg | Robert Riggio | | 3B | 21 | 9/12/1975 | 6-1 | 195 | R | R | Rookie | | Lehman College, City University of New York |
| 41 | 1236** | June-Reg | Geoff Geary | | p | 20 | 8/26/1976 | 6-0 | 176 | R | R | MLB | 2003-2008 | University of Oklahoma |
| 42 | 1263 | June-Reg | Justin Ames | | p | | | | | | | - | | Moorpark High School (Moorpark,CA) |
| 43 | 1287 | June-Reg | Ryan Pearson | | of | 22 | 8/11/1974 | 6-2 | 215 | B | R | Rookie | | Troy State University |
| 44 | 1309 | June-Reg | Marcus Quinones | | p | 21 | 2/26/1976 | 6-1 | 190 | B | R | A+ | | Lee Junior College |
| 45 | 1330 | June-Reg | Nick Caiazzo | | C | 22 | 5/17/1975 | 6-4 | 215 | R | R | A+ | | |
| 46 | 1350 | June-Reg | Eric Tomlinson | | of | | | | | | | College | | Granbury High School (Granbury,TX) |
| 47 | 1369 | June-Reg | Jeff Savage | | p | | | | | | | - | | Palm Beach Gardens High School (Palm Beach Gardens,FL) |
| 48 | 1387 | June-Reg | Oscar Ramirez | | SS | | | | | | | - | | |
| 49 | 1404 | June-Reg | Nick Quinn | | of | | | | | | | - | | |
| 50 | 1420 | June-Reg | Jimmy Smith | | of | | | | | | | - | | Lake Mary High School (Lake Mary,FL) |
| 51 | 1435 | June-Reg | Jose Camilo | | 2B | | | | | | | - | | North Florida Community College |
| 52 | 1449 | June-Reg | Michael Oiler | | SS | | | | | | | - | | Watertown High School (Watertown,WI) |
| 53 | 1463 | June-Reg | Bennie Harris | | of | | | | | | | - | | Myers Park High School (Charlotte,NC) |
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