| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 18 | June-Reg | Mark Mangum | $$ | P | 18 | 8/24/1978 | 6-2 | 180 | R | R | AA | | Kingwood High School (Kingwood,TX) |
| 2 | 70 | June-Reg | Aaron Cook | | P | 18 | 2/8/1979 | 6-3 | 175 | R | R | MLB | 2002-2008 | Hamilton High School (Hamilton,OH) |
| 3 | 102 | June-Reg | Todd Sears | | 1B | 21 | 10/23/1975 | 6-5 | 215 | L | R | MLB | 2002-2003 | University of Nebraska |
| 4 | 132 | June-Reg | Chone Figgins | | SS | 19 | 1/22/1978 | 5-9 | 155 | B | R | MLB | 2002-2008 | Brandon High School (Brandon,FL) |
| 5 | 162 | June-Reg | Justin Miller | | P | 19 | 8/27/1977 | 6-2 | 195 | R | R | MLB | 2002-2008 | Los Angeles Harbor Community College |
| 6 | 192** | June-Reg | Sam Smith | | SS | 18 | 3/21/1979 | 6-4 | 210 | R | R | A+ | | Jasper High School (Jasper,TX) |
| 7 | 222 | June-Reg | Jake Kringen | | P | 21 | 6/25/1976 | 6-2 | 215 | L | L | A+ | | University of Washington |
| 8 | 252 | June-Reg | Jeremy Jackson | | OF | 21 | 5/9/1976 | 6-2 | 195 | L | R | A+ | | University of Arkansas |
| 9 | 282 | June-Reg | D.J. Johnson | | P | 22 | 10/6/1974 | 6-3 | 200 | R | R | A+ | | Kansas State University |
| 10 | 312 | June-Reg | Derrick Vargas | | P | 20 | 5/13/1977 | 6-4 | 204 | L | L | A- | | Chabot College |
| 11 | 342 | June-Reg | Tino Sanchez | | OF | 18 | 2/2/1979 | 6-0 | 175 | B | R | AAA | | Luis Munoz Marin High School (Anasco,PR) |
| 12 | 372 | June-Reg | Ryan Seifert | | p | 21 | 8/14/1975 | 6-5 | 220 | R | R | AAA | | |
| 13 | 402 | June-Reg | Rodney Little | | p | 18 | 8/14/1978 | 6-3 | 176 | R | R | A- | | Perry Central High School (Hazard,KY) |
| 14 | 432 | June-Reg | Joseph Gonzales | | C | 22 | 4/25/1975 | 6-0 | 214 | R | R | - | | Southeastern Louisiana University |
| 15 | 462 | June-Reg | Rodney Little | | p | 18 | 8/14/1978 | 6-3 | 176 | R | R | A- | | Perry Central High School (Hazard,KY) |
| 16 | 492 | June-Reg | Jason Franklin | | 3B | 20 | 12/20/1976 | 6-1 | 200 | R | R | A- | | Cumberland University (Tenn.) |
| 17 | 522 | June-Reg | Jerome Alviso | | SS | 21 | 9/4/1975 | 6-1 | 180 | B | R | AAA | | California State University, Fullerton |
| 18 | 552 | June-Reg | Ara Petrosian | | p | 22 | 3/3/1975 | 6-4 | 225 | R | R | A+ | | Long Beach State University |
| 19 | 582 | June-Reg | Mike Johns | | SS | 21 | 8/26/1975 | 6-2 | 190 | R | R | A | | Tulane University |
| 20 | 612** | June-Reg | Mark Woodyard | | 1B | 18 | 12/19/1978 | 6-2 | 185 | R | R | MLB | 2005-2005 | Grand Bay High School (Grand Bay,AL) |
| 21 | 642 | June-Reg | Armando Gonzalez | | p | 19 | 10/12/1977 | 6-1 | 195 | R | R | A | | Cerritos College |
| 22 | 672 | June-Reg | Kendall Rhodes | | p | 20 | 5/29/1977 | 6-1 | 175 | R | R | Ind | | Angelina College |
| 23 | 702 | June-Reg | Jacob Minter | | 1B | | | | | | | College | | Bishop Blanchet High School (Seattle,WA) |
| 24 | 732 | June-Reg | Melvin Rosario | | OF | 18 | 9/22/1978 | 6-1 | 172 | L | L | A+ | | Indian Hills Community College-Centerville |
| 25 | 762 | June-Reg | Trevor Kitsch | | C | | | | | | | - | | Kelowna High School (Kelowna,BC) |
| 26 | 792 | June-Reg | Jeremy Schultz | | p | | | | | | | - | | Mason City High School (Mason City,IA) |
| 27 | 822 | June-Reg | Justin Lombardi | | p | 17 | 8/21/1979 | 6-4 | 215 | L | L | A+ | | Coyle Cassidy High School (Taunton,MA) |
| 28 | 852 | June-Reg | Rocky Kirk | | p | | | | 0 | | | - | | Viewman High School (Bountiful,UT) |
| 29 | 882** | June-Reg | Dan Kelly | | p | | | | | | | - | | Okaloosa-Walton College |
| 30 | 912 | June-Reg | J.J. Easter | | OF | 19 | 1/6/1978 | 5-11 | 170 | R | R | Rookie | | Mount Union High School (Mount Union,PA) |
| 31 | 942 | June-Reg | Brian Putnam | | p | | | | | | | - | | Indianola High School (Indianola,MS) |
| 32 | 972 | June-Reg | Braxton Batson | | p | | | | | | | - | | Mississippi Gulf Coast Community College |
| 33 | 1002 | June-Reg | Cody Trask | | p | 19 | 3/19/1978 | 6-3 | 205 | R | R | Rookie | | Riverside Community College |
| 34 | 1032 | June-Reg | Mark Scates | | Of | | | | | | | - | | Coeur D'Alene High School (Coeur D'Alene,ID) |
| 35 | 1062 | June-Reg | James McCoy | | Of | | | | | | | - | | Miami-Dade Community College Kendall |
| 36 | 1092** | June-Reg | Alfredo Amezaga | | SS | 19 | 1/16/1978 | 5-10 | 180 | R | R | MLB | 2002-2008 | Miami Senior High School (Miami,FL) |
| 37 | 1122 | June-Reg | Ronny Marmol | | C | | | | | | | - | | |
| 38 | 1152 | June-Reg | Ryan Price | | p | 19 | 1/31/1978 | 6-3 | 199 | R | R | AA | | Eastern New Mexico University |
| 39 | 1182 | June-Reg | Walcott Richardson | | Of | | | | | | | - | | Dracut High School (Dracut,MA) |
| 40 | 1212** | June-Reg | Brandon Roberson | | p | 19 | 4/26/1978 | 6-3 | 190 | R | R | A+ | | Hill College |
| 41 | 1239 | June-Reg | Yamilke Ulloa | | p | | | | | | | - | | Hialeah High School (Hialeah,FL) |
| 42 | 1266 | June-Reg | Matthew Ortiz | | C | 19 | 4/18/1978 | 5-11 | 195 | R | R | AA | | Grossmont College |
| 43 | 1290 | June-Reg | Shaun Wooley | | p | | | | | | | - | | Rancho Santiago College |
| 44 | 1312 | June-Reg | Chad Elliot | | p | | | | | | | - | | Rancho Santiago College |
| 45 | 1333 | June-Reg | Casey Lopez | | 3B | | | | | | | - | | Los Altos High School (Los Altos,CA) |
| 46 | 1352 | June-Reg | Matthew Thomas | | p | | | | | | | - | | Weatherford High School (Weatherford,TX) |
| 47 | 1371 | June-Reg | Bobby Bass | | of | | | | | | | - | | Livermore High School (Livermore,CA) |
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