| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 26 | June-Reg | Josh Garrett | $$ | P | 18 | 1/12/1978 | 6-4 | 205 | R | R | AA | | South Spencer High School (Rockport,IN) |
| 1 | 34 | June-Reg | Chris Reitsma | $$ | P | 18 | 12/31/1977 | 6-5 | 214 | R | R | MLB | 2001-2007 | Calgary Christian High School (Calgary,AB) |
| 2 | 39 | June-Reg | Gary LoCurto | $$ | 1B | 18 | 5/25/1978 | 6-1 | 200 | L | R | A | | University of San Diego High School (San Diego,CA) |
| 2 | 61 | June-Reg | Jason Sekany | | P | 20 | 7/20/1975 | 6-4 | 214 | R | R | AAA | | University of Virginia |
| 3 | 91 | June-Reg | Dernell Stenson | | OF | 18 | 6/17/1978 | 6-1 | 215 | L | L | MLB | 2003-2003 | La Grange High School (La Grange,GA) |
| 4 | 121 | June-Reg | John Barnes | | OF | 20 | 4/24/1976 | 6-2 | 205 | R | R | MLB | 2000-2001 | Grossmont College |
| 5 | 151 | June-Reg | Bobby Brito | | C | 18 | 12/23/1977 | 5-9 | 180 | R | R | Rookie | | Cypress High School (Cypress,CA) |
| 6 | 181 | June-Reg | Mike Perini | | OF | 18 | 4/27/1978 | 6-2 | 200 | L | R | A- | | |
| 7 | 211 | June-Reg | Rob Ramsey | | P | | | | | | | - | | Washington State University |
| 8 | 241 | June-Reg | Justin Duchscherer | | P | 18 | 11/19/1977 | 6-3 | 164 | R | R | MLB | 2001-2008 | Coronado High School (Lubbock,TX) |
| 9 | 271 | June-Reg | Marcus Martinez | | P | | | | | | | Rookie | | Monterey High School (Lubbock,TX) |
| 10 | 301 | June-Reg | Shea Hillenbrand | | SS | 20 | 7/27/1975 | 6-1 | 200 | R | R | MLB | 2001-2007 | Mesa Community College |
| 11 | 331 | June-Reg | Scott Musgrave | | P | 22 | 4/24/1974 | 5-10 | 190 | L | L | A+ | | Appalachian State University |
| 12 | 361 | June-Reg | Dion Ruecker | | SS | 22 | 9/9/1973 | 5-10 | 180 | R | R | A- | | Texas Tech University |
| 13 | 391 | June-Reg | Skipp Benzing | | p | 19 | 11/29/1976 | 6-2 | 180 | L | R | A- | | Indian Hills Community College-Centerville |
| 14 | 421 | June-Reg | Justin Lynch | | p | | | | | | | - | | Marina High School (Huntington Beach,CA) |
| 15 | 451 | June-Reg | Mark Robbins | | 3B | | | | | | | - | | Derry High School (Derry,KS) |
| 16 | 481 | June-Reg | Jeff Keaveney | | 1B-OF | 20 | 10/7/1975 | 6-5 | 240 | R | R | A | | University of Southern Maine |
| 17 | 511 | June-Reg | Justin Crisafulli | | p | | | | | | | - | | Arizona Western College |
| 18 | 541 | June-Reg | Mike McKinley | | OF | 21 | 11/30/1974 | 6-0 | 180 | R | R | A- | | Scottsdale Community College |
| 19 | 571 | June-Reg | MIke Rupp | | p | 18 | 2/21/1978 | 6-3 | 205 | R | R | A+ | | Monte Vista High School (Spring Valley,CA) |
| 20 | 601 | June-Reg | Chuck Beale | | p | 22 | 3/19/1974 | 6-0 | 210 | R | R | AA | | Stetson University |
| 21 | 631 | June-Reg | Javier Fuentes | | SS-2B | 21 | 9/27/1974 | 6-1 | 182 | R | R | AA | | Arizona State University |
| 22 | 661** | June-Reg | Aaron Harang | | p | 18 | 5/9/1978 | 6-7 | 240 | R | R | MLB | 2002-2008 | Patrick Henry High School (San Diego,CA) |
| 23 | 691 | June-Reg | Paul McCurtain | | p | 20 | 2/5/1976 | 6-1 | 190 | R | R | AA | | Mesa Community College |
| 24 | 721 | June-Reg | Robert Brandt | | p | | | | | | | - | | A&M Consolidated High School (College Station,TX) |
| 25 | 751 | June-Reg | Dominic Barrett | | OF | | | 6-0 | 175 | R | R | - | | Trimble Tech High School (Fort Worth,TX) |
| 26 | 781 | June-Reg | Chris Thompson | | p | 23 | 9/29/1972 | 6-2 | 202 | R | R | AAA | | Saint Leo University |
| 27 | 811 | June-Reg | Ryan Murray | | p | | | | | | | - | | Tampa Bay Technical High School (Tampa,FL) |
| 28 | 841 | June-Reg | Erik Metzger | | C | 21 | 7/27/1974 | 6-0 | 205 | R | R | A+ | | Samford University |
| 29 | 871** | June-Reg | Josh Stewart | | p | 17 | 12/5/1978 | 6-3 | 205 | L | L | MLB | 2003-2004 | Livingston Central High School (Ledbetter,KY) |
| 30 | 901 | June-Reg | William Whitaker | | p | | | | | | | - | | First Coast High School (Jacksonville,FL) |
| 31 | 931 | June-Reg | Matt Frick | | C | 20 | 1/2/1976 | 6-2 | 220 | R | R | A+ | | Yavapai College |
| 32 | 961** | June-Reg | Mike Bynum | | ip | 18 | 3/20/1978 | 6-4 | 200 | L | L | MLB | 2002-2004 | Middleburg High School (Middleburg,FL) |
| 33 | 991 | June-Reg | Adam Roller | | p | 18 | 6/27/1978 | 6-3 | 208 | R | R | AA | | Lakeland High School (Lakeland,FL) |
| 34 | 1021 | June-Reg | Jaime Bonilla | | p | | | | | | | - | | Lake City Community College |
| 35 | 1051 | June-Reg | Kasey Kuhlmeyer | | p | 17 | 11/23/1978 | 6-0 | 190 | R | L | - | | San Pasqual High School (Escondido,CA) |
| 36 | 1081 | June-Reg | Ken Sarna | | SS | 18 | 1/25/1978 | 6-2 | 195 | R | R | A- | | Durango High School (Las Vegas,NV) |
| 37 | 1111 | June-Reg | Jeremy Swindell | | p | 18 | 8/4/1977 | 6-2 | 220 | L | L | A | | Clear Lake High School (Houston,TX) |
| 38 | 1141 | June-Reg | Travis McRoberts | | SS | | | | | | | - | | El Capitan High School (Lakeside,CA) |
| 39 | 1171 | June-Reg | Andy Thompson | | Of | 20 | 8/8/1975 | 6-3 | 220 | R | R | MLB | 2000-2000 | Delta State University |
| 40 | 1201 | June-Reg | Curtis Anthony | | SS | | | | | | | - | | |
| 42 | 1257 | June-Reg | Wesley Warren | | of | | | | | | | - | | Arcadia High School (Phoenix,AZ) |
| 43 | 1284 | June-Reg | Jamaon Halbig | | of | | | | | | | - | | Southwestern Community College |
| 44 | 1310 | June-Reg | Bart Vaughn | | p | | | | | | | - | | Manatee Community College |
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