| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 1 | June-Reg | Kris Benson | $$ | P | 21 | 11/7/1974 | 6-4 | 188 | R | R | MLB | 1999-2006 | Clemson University |
| 2 | 36 | June-Reg | Andy Prater | $$ | P | | | | | | | A | | McCluer North High School (Florissant,MO) |
| 3 | 66 | June-Reg | Luis Lorenzana | | SS | 17 | 11/9/1978 | 6-2 | 193 | R | R | AAA | | Montgomery High School (San Diego,CA) |
| 4 | 96 | June-Reg | Lee Evans | | C | 18 | 7/20/1977 | 6-1 | 185 | B | R | AAA | | Tuscaloosa County High School (Northport,AL) |
| 5 | 126 | June-Reg | Tike Redman | | OF | 19 | 3/10/1977 | 5-11 | 166 | L | L | MLB | 2000-2007 | Tuscaloosa Academy High School (Tuscaloosa,AL) |
| 6 | 156 | June-Reg | Yustin Jordan | | SS | 17 | 8/15/1978 | 6-3 | 214 | R | R | A | | Monticello High School (Monticello,AR) |
| 7 | 186 | June-Reg | Andrew Hohenstein | | P | 18 | 9/27/1977 | 6-4 | 210 | R | R | Rookie | | Norte Vista High School (Riverside,CA) |
| 8 | 216 | June-Reg | Bobby Vogt | | P | 17 | 10/19/1978 | 6-6 | 195 | L | L | A- | | Armwood High School (Seffner,FL) |
| 9 | 246 | June-Reg | Jess Siciliano | | P | 19 | 8/31/1976 | 6-2 | 190 | R | R | A | | Rockland Community College |
| 10 | 276 | June-Reg | Carlos Rivera | | 1B | 18 | 6/10/1978 | 6-1 | 245 | L | L | MLB | 2003-2004 | |
| 11 | 306 | June-Reg | Jason Haynie | | P | 22 | 3/29/1974 | 6-0 | 194 | L | L | AAA | | University of South Carolina |
| 12 | 336 | June-Reg | Jeremy Rockow | | OF | | | | | | | Rookie | | Fort Myers High School (Fort Myers,FL) |
| 13 | 366 | June-Reg | Xavier Burns | | 3B | 21 | 5/8/1975 | 5-11 | 190 | R | R | A+ | | Central State University |
| 14 | 396 | June-Reg | Ali Brooks | | SS-OF | | | | | | | A- | | Laney College |
| 15 | 426 | June-Reg | Nick Day | | OF | 18 | 1/16/1978 | 6-2 | 205 | R | R | A | | Green Valley High School (Henderson,NV) |
| 16 | 456 | June-Reg | Michael Chaney | | p | 21 | 10/3/1974 | 6-3 | 200 | B | L | AA | | Bowling Green State University |
| 17 | 486** | June-Reg | Mike Gonzalez | | p | 18 | 5/23/1978 | 6-2 | 213 | R | L | MLB | 2003-2007 | Faith Christian Academy High School (Pasadena,TX) |
| 18 | 516 | June-Reg | Jason Elmore | | p | 22 | 5/31/1974 | 6-5 | 245 | R | R | A | | |
| 19 | 546 | June-Reg | Garrett Larkin | | SS | 21 | 6/20/1975 | 6-2 | 180 | L | R | A- | | Merrimack College |
| 20 | 576 | June-Reg | Jacob Jensen | | SS | | | | | | | Rookie | | Fresno City College |
| 21 | 606 | June-Reg | Paul Ah Yat | | p | 21 | 10/13/1974 | 6-1 | 192 | R | L | AAA | | University of Hawaii-Manoa |
| 22 | 636 | June-Reg | Luis Gonzalez | | p | 22 | 5/3/1974 | 6-2 | 190 | R | R | A- | | University of New Mexico |
| 23 | 666 | June-Reg | Morgan Walker | | 1B | 21 | 8/7/1974 | 6-3 | 215 | R | L | A+ | | Lamar University |
| 24 | 696** | June-Reg | Mark Freed | | p | 17 | 8/10/1978 | 6-5 | 215 | L | L | AAA | | |
| 25 | 726 | June-Reg | Michael Gresko | | p | 19 | 10/27/1976 | 6-8 | 200 | L | L | A | | Mercer County Community College |
| 26 | 756 | June-Reg | Daniel Tobias | | p | 20 | 8/20/1975 | 6-5 | 200 | R | R | Rookie | | |
| 27 | 786** | June-Reg | Kendall Rhodes | | p | 19 | 5/29/1977 | 6-1 | 175 | R | R | Ind | | Crockett High School (Crockett,TX) |
| 28 | 816** | June-Reg | Willie Harris | | 2B-SS | 18 | 6/22/1978 | 5-9 | 175 | L | R | MLB | 2001-2007 | Cairo High School (Cairo,GA) |
| 29 | 846 | June-Reg | Ender Classen | | SS | 18 | 4/1/1978 | 6-3 | 201 | B | R | A- | | |
| 30 | 876 | June-Reg | Wyatt Brooks | | p | 22 | 12/13/1973 | 6-1 | 165 | R | L | A | | University of North Florida |
| 31 | 906 | June-Reg | Makani Lum | | C-3B | | | | | | | - | | Kamehameha High School (Honolulu,HI) |
| 32 | 936 | June-Reg | Chad Ciccone | | C | | | | | | | - | | Hopewell High School (Aliquippa,PA) |
| 33 | 966 | June-Reg | Carlton McKenzie | | Of-3B | | | | | | | Rookie | | Raritan Valley Community College |
| 34 | 996** | June-Reg | Ramonzo Douglas | | 1B | | | | 0 | | | Rookie | | Eureka High School (Eureka,MO) |
| 35 | 1026 | June-Reg | Joseph Hunt | | Of | 20 | 9/3/1975 | 6-1 | 180 | B | R | A- | | Santa Fe Community College |
| 36 | 1056 | June-Reg | Barry Johnson | | p-1B | 26 | 8/21/1969 | 6-4 | 200 | R | R | - | | Hales Franciscan High School (Chicago,IL) |
| 37 | 1086 | June-Reg | Brandon Schliinz | | 3B-C | | | | | | | - | | Orono High School (Loretto,MN) |
| 38 | 1116** | June-Reg | Jamal Strong | | Of-SS | 17 | 8/5/1978 | 5-10 | 180 | R | R | MLB | 2003-2005 | Pasadena High School (Pasadena,CA) |
| 39 | 1146** | June-Reg | Josh Bonifay | | SS-2B | 17 | 7/30/1978 | 6-0 | 187 | R | R | AA | | T.C. Roberson High School (Asheville,NC) |
| 40 | 1176** | June-Reg | Jesse Daggett | | C | 17 | 7/3/1978 | 6-4 | 220 | R | R | A- | | Crescenta Valley High School (La Crescenta,CA) |
| 41 | 1206 | June-Reg | Scott May | | C | | | | | | | A | | Carson-Newman College |
| 42 | 1234** | June-Reg | James Mcauley | | C | 18 | 12/17/1977 | 6-0 | 185 | R | R | A+ | | Plant High School (Tampa,FL) |
| 43 | 1262** | June-Reg | Jeremy Sickles | | C | 18 | 1/16/1978 | 6-4 | 194 | R | R | A+ | | Millikan High School (Long Beach,CA) |
| 44 | 1289 | June-Reg | Robert Moore | | 2B | | | | | | | - | | Coffee High School (Douglas,GA) |
| 45 | 1315** | June-Reg | Chris Capuano | | p | 16 | 8/19/1979 | 6-3 | 215 | L | L | MLB | 2003-2007 | Cathedral High School (Springfield,MA) |
| 46 | 1340 | June-Reg | Ricardo Finol | | p | 22 | 5/10/1974 | 6-0 | 170 | B | R | A | | Navarro College |
| 47 | 1365 | June-Reg | Ian Rauls | | of | 18 | 10/2/1977 | 6-2 | 170 | L | L | A- | | Mercer County Community College |
| 48 | 1389 | June-Reg | Duane Eason | | | | | | | | | - | | Troy State University |
| 49 | 1412 | June-Reg | Kevin Chapman | | of | | | | | | | - | | Bernards High School (Peapack,NJ) |
| 50 | 1435** | June-Reg | Jason Bowers | | SS | 18 | 1/27/1978 | 5-11 | 170 | R | R | AAA | | Laurel Highlands High School (Uniontown,PA) |
| 51 | 1458 | June-Reg | Francisco Lebron | | 1B | 21 | 5/10/1975 | 6-6 | 230 | B | R | AA | | Florida International University |
| 52 | 1479 | June-Reg | Dwight Edge | | of | 17 | 7/7/1978 | 6-7 | 230 | R | R | A+ | | Apopka High School (Apopka,FL) |
| 53 | 1498 | June-Reg | Rob Mackowiak | | SS-2B | 20 | 6/20/1976 | 5-10 | 168 | L | R | MLB | 2001-2007 | South Suburban College |
| 54 | 1515** | June-Reg | J.D. Arteaga | | p | 21 | 8/2/1974 | 6-3 | 227 | L | L | AAA | | University of Miami (Florida) |
| 55 | 1531 | June-Reg | Nathan Shepperson | | 1B | | | | | | | - | | Virginia Military Institute |
| 56 | 1547 | June-Reg | Steven Yaeger | | of | | | | | | | - | | Thousand Oaks High School (Thousand Oaks,CA) |
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