| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 13 | June-Reg | Chad McConnell | | OF | 21 | 12/13/1970 | 6-1 | 200 | R | R | AA | | Creighton University |
| 3 | 80 | June-Reg | Trevor Humphry | | P | 20 | 10/31/1971 | 6-2 | 210 | R | R | A+ | | Westark Community College |
| 4 | 109 | June-Reg | Jason Moler | | C | | | | | | | AAA | | California State University, Fullerton |
| 5 | 137 | June-Reg | Larry Mitchell | | P | 20 | 10/16/1971 | 6-1 | 200 | R | R | MLB | 1996-1996 | James Madison University |
| 6 | 165 | June-Reg | Jamie Sepeda | | P | | | | | | | AAA | | Stanford University |
| 7 | 193 | June-Reg | Steve Solomon | | OF | | | | | | | AA | | Stanford University |
| 8 | 221 | June-Reg | Jon McMullen | | 1B | | | | | | | A+ | | Rio Mesa High School (Oxnard,CA) |
| 9 | 249** | June-Reg | Nate Brown | | P | | | | | | | A+ | | University of California |
| 10 | 277 | June-Reg | Stan Evans | | OF | | | | | | | A+ | | Seminole Community College |
| 11 | 305** | June-Reg | Casey Blake | | SS | 18 | 8/23/1973 | 6-2 | 200 | R | R | MLB | 1999-2008 | Indianola High School (Indianola,IA) |
| 12 | 333 | June-Reg | Jon Zuber | | p-1B | 22 | 12/10/1969 | 6-0 | 190 | L | L | MLB | 1996-1998 | University of California |
| 13 | 361 | June-Reg | Alan Burke | | 1B-3b | 21 | 11/28/1970 | 6-0 | 195 | R | R | AA | | Long Beach State University |
| 14 | 389 | June-Reg | David Gomez | | 2B | | | | | | | - | | University of Delaware |
| 15 | 417 | June-Reg | Shawn Wills | | OF | | | | | | | A | | UCLA |
| 16 | 445 | June-Reg | Tony Costa | | p | 21 | 12/19/1970 | 6-4 | 210 | R | R | AA | | West Hills College |
| 17 | 473 | June-Reg | Grant Hohman | | SS | | | | | | | - | | St. Bernard High School (Playa del Ray,CA) |
| 18 | 501** | June-Reg | Jon Morris | | C | | | | | | | A | | Northeastern Oklahoma A&M College |
| 19 | 529 | June-Reg | Scott Haws | | C | | | | | | | AA | | Bucks County Community College (PA) |
| 20 | 557 | June-Reg | Michael Thompson | | OF | | | | | | | A- | | Gulf Coast Community College |
| 21 | 585 | June-Reg | Joe Scopio | | 2B | | | | | | | A- | | Gloucester County College |
| 22 | 613 | June-Reg | Tim Comish | | OF | | | | | | | - | | Ventura College |
| 23 | 641 | June-Reg | Bobby Estalella | | OF | 17 | 8/23/1974 | 6-1 | 205 | R | R | MLB | 1996-2004 | Cooper City High School (Cooper City,FL) |
| 24 | 669 | June-Reg | Steven Nutt | | p | | | | | | | A | | Centenary College |
| 25 | 697** | June-Reg | Brian Brewer | | p | 20 | 12/10/1971 | 6-0 | 207 | L | L | AA | | Sacramento City College |
| 26 | 725 | June-Reg | Jeremy Kendall | | OF | | | | | | | AA | | Winona State University |
| 27 | 753 | June-Reg | Dell Allen | | C-1B | | | | | | | Rookie | | Black Hawk College-Moline |
| 28 | 781 | June-Reg | Tony Fiore | | p | 20 | 10/12/1971 | 6-4 | 210 | R | R | MLB | 2000-2003 | Triton College |
| 29 | 809 | June-Reg | David Fisher | | 2B | | | | | | | AAA | | Missouri Southern State College |
| 30 | 837 | June-Reg | Eric Smith | | p | | | | | | | AA | | Brigham Young University |
| 31 | 865 | June-Reg | Chris Phipps | | p | | | | | | | A | | Tennessee High School (Bristol,TN) |
| 32 | 893** | June-Reg | Clint Whitworth | | p | | | | | | | A- | | Oklahoma City University |
| 33 | 921 | June-Reg | Blake Doolan | | p | 23 | 2/11/1969 | 6-0 | 178 | R | R | AAA | | Northeast Louisiana University |
| 34 | 949 | June-Reg | Bo Gray | | p | | | | | | | - | | Cherry Hill West High School (Cherry Hill,NJ) |
| 35 | 977 | June-Reg | Mark Tranberg | | p | | | | | | | AAA | | California State University, Dominguez Hills |
| 36 | 1005 | June-Reg | Thomas Irwin | | p | | | | | | | A | | California State University |
| 37 | 1033 | June-Reg | E.J. Brophy | | C | | | | | | | AAA | | University of Alabama-Birmingham |
| 38 | 1061 | June-Reg | Ronald Kratz | | SS-3B | | | | | | | A | | Kutztown University of Pennsylvania |
| 39 | 1089 | June-Reg | Phil Romero | | 2B | | | | | | | A | | Fresno State University |
| 40 | 1117 | June-Reg | Ryan McWilliams | | p | | | | | | | A- | | Southern Illinois University |
| 41 | 1145 | June-Reg | Ben Martinez | | of | | | | | | | Rookie | | Central High School (St. Paul,MN) |
| 42 | 1173 | June-Reg | Shane Hobbs | | C | | | | | | | Rookie | | Santana High School (Santee,CA) |
| 43 | 1201 | June-Reg | Matthew Kilgore | | C | | | | | | | - | | Dobyns-Bennett High School (Kingsport,TN) |
| 44 | 1229 | June-Reg | Dan McDonald | | of | | | | | | | A- | | Sarasota High School (Sarasota,FL) |
| 45 | 1257 | June-Reg | Matt Rosemeyer | | of | | | | | | | - | | El Dorado High School (Las Vegas,NV) |
| 46 | 1285 | June-Reg | Charlton Moore | | of | | | | | | | A- | | Chicago State University |
| 47 | 1313 | June-Reg | Michael Shipman | | C | | | | | | | A- | | Dexter High School (Dexter,MO) |
| 48 | 1341 | June-Reg | Charles Burns | | of | | | | | | | - | | Grapevine High School (Grapevine,TX) |
| 49 | 1369** | June-Reg | Chris Freeman | | p | 19 | 8/27/1972 | 6-4 | 205 | R | R | AA | | Walters State Community College |
| 50 | 1397 | June-Reg | Angel Aragon | | p | 18 | 12/19/1973 | 6-1 | 230 | R | R | AA | | Channel Islands High School (Oxnard,CA) |
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