| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2006 | 41 | 1217 | June-Reg | Jeremy Toole ** | Kansas City Royals | P | A | 2008-2010 | H | Huntsville (Huntsville,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1218 | June-Reg | Jay Taylor | Colorado Rockies | P | - | H | West Seattle (Seattle,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 41 | 1219 | June-Reg | Michael Dufek | Tampa Bay Rays | RF | Ind | 2007-2010 | H | Desert Mountain (Scottsdale,AZ) | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1220 | June-Reg | Scott Kuhns | Pittsburgh Pirates | P | - | C | Parkland College | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 41 | 1221 | June-Reg | Brandon Fromm | Seattle Mariners | 1B | A- | 2004-2008 | C | San Jose State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1222 | June-Reg | Taylor Freeman ** | Detroit Tigers | C | A+ | 2008-2012 | H | Carney (Carney,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1223 | June-Reg | Todd McCraw | Los Angeles Dodgers | C | - | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | ||
| 2006 | 41 | 1224 | June-Reg | Jeremy Erben ** | Cincinnati Reds | P | A+ | 2008-2013 | H | New Braunfels (New Braunfels,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1225 | June-Reg | Scott Migl ** | Baltimore Orioles | P | A- | 2007-2010 | H | St. Pius X (Houston,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1226 | June-Reg | Bo Merrell | San Francisco Giants | SS | NCAA | 2006-2008 | C | Seward County Community College | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1227 | June-Reg | Quinton Marsh | Arizona Diamondbacks | P | - | H | Wickenburg (null) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | ||
| 2006 | 41 | 1228 | June-Reg | Brandon Gribbin | Texas Rangers | P | - | C | Golden West College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 41 | 1229 | June-Reg | Jonathan Negron | Chicago Cubs | P | - | H | Puerto Rico Baseball Acad (Gurabo,PR) | SF | PR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 41 | 1230 | June-Reg | C.J. Ebarb | Toronto Blue Jays | C | AAA | 2003-2009 | C | Lamar University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1231 | June-Reg | Brad Peacock | Washington Nationals | P | MLB | 2007-2013 | H | Palm Beach Central (Wellington,FL) | SF | FL | 4 | 0 | 0 | 0 | 0 | 0 | .000 | 2 | 0 | 0.75 | 0 | 12 | 4 | 2 |
| 2006 | 41 | 1232 | June-Reg | Matt Poulk | Milwaukee Brewers | 3B | NCAA | 2003-2006 | C | University of North Carolina at Wilmington | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1233 | June-Reg | Mike Freeman ** | San Diego Padres | SS | AA | 2007-2013 | H | Edgewater (Orlando,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1234 | June-Reg | Victor Black ** | New York Mets | P | AAA | 2008-2013 | H | Amarillo (Amarillo,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1236 | June-Reg | Joan Ortiz | Minnesota Twins | P | RK | 2006-2006 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 41 | 1237 | June-Reg | Michael Antonini ** | Philadelphia Phillies | P | AAA | 2007-2012 | C | Georgia College & State University | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1238 | June-Reg | Jeremy Weih | Oakland Athletics | C | NCAA | 2007-2007 | H | Wilton (Wilton,IA) | SF | IA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1239 | June-Reg | Axel Gonzalez | Houston Astros | CF | A- | 2007-2007 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 41 | 1240 | June-Reg | Keegan Dennis | Atlanta Braves | P | NCAA | 2009-2010 | H | Carmi-White County (Carmi,IL) | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1241 | June-Reg | Kyle Paul | Cleveland Indians | C | NCAA | 2007-2008 | C | Vernon College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1242 | June-Reg | Brian Hobbs | Los Angeles Angels | OF | NCAA | 2007-2008 | C | Chipola College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1243 | June-Reg | Peter Tountas | Boston Red Sox | SS | Ind | 2008-2011 | C | Jefferson Community College | SF | KY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1244 | June-Reg | Ohmed Danesh | New York Yankees | LF | NCAA | 2007-2010 | H | Dr. Phillips (Orlando,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1245 | June-Reg | Mike Bolsenbroek ** | Chicago White Sox | P | A | 2008-2010 | C | Santa Ana College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 41 | 1246 | June-Reg | Mitch Canham ** | St. Louis Cardinals | C | AAA | 2004-2013 | C | Oregon State University | SF | OR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |