| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2006 | 36 | 1067 | June-Reg | Manuel Garcia | Kansas City Royals | P | - | C | Cochise College | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 36 | 1068 | June-Reg | Michael Diaz | Colorado Rockies | C | - | H | Luis Munoz Marin (Anasco,PR) | SF | PR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 36 | 1069 | June-Reg | Wally Marciel | Tampa Bay Rays | P | NCAA | 2007-2011 | H | Iolani (Honolulu,HI) | SF | HI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1070 | June-Reg | Chad Arnold ** | Pittsburgh Pirates | P | NCAA | 2008-2011 | H | Southridge (Kennewick,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1071 | June-Reg | Kyle Haas ** | Seattle Mariners | P | RK | 2008-2009 | C | Douglas College | SF | BC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1072 | June-Reg | Chad Nading ** | Detroit Tigers | P | RK | 2009-2012 | H | East (Anchorage,AK) | SF | AK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1073 | June-Reg | Robert Taylor ** | Los Angeles Dodgers | C | AAA | 1992-2010 | C | Laredo Community College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1074 | June-Reg | Nick Wandless | Cincinnati Reds | P | RK | 2006-2007 | C | University of South Carolina-Aiken | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1075 | June-Reg | Pat Egan | Baltimore Orioles | P | AAA | 2003-2013 | C | Quinnipiac University | SF | CT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1076 | June-Reg | Matt Downs | San Francisco Giants | 3B | MLB | 2003-2013 | C | University of Alabama | SF | AL | 527 | 31 | 1 | 20 | 66 | 3 | .230 | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1077 | June-Reg | Jason Durst | Arizona Diamondbacks | P | A- | 2007-2008 | C | Lake Sumter Community College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1078 | June-Reg | John Slusarz | Texas Rangers | P | A+ | 2005-2010 | C | University of Connecticut | SF | CT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1079 | June-Reg | Miguel Cuevas-Novas | Chicago Cubs | P | A+ | 2006-2007 | C | Los Angeles Pierce College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1080 | June-Reg | Domonique Rodgers | Toronto Blue Jays | CF | NCAA | 2008-2009 | C | Sacramento City College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1081 | June-Reg | Jeremy Goldschmeding | Washington Nationals | SS | A- | 2003-2006 | C | Dallas Baptist University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1082 | June-Reg | Clay Jones ** | Milwaukee Brewers | C | A | 2009-2011 | H | Bibb County (Centreville,AL) | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1083 | June-Reg | Daniel Johansen | San Diego Padres | P | - | H | Woodinville (Woodinville,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 36 | 1084 | June-Reg | Edgar Ramirez | New York Mets | P | AAA | 2003-2012 | C | Louisiana State University | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1085 | June-Reg | Dave Williams | Florida Marlins | RF | MLB | 1998-2011 | C | Rutgers University | SF | NJ | 123 | 3 | 0 | 1 | 9 | 0 | .122 | 22 | 31 | 4.83 | 0 | 408 | 245 | 72 |
| 2006 | 36 | 1086 | June-Reg | J.D. Martinez ** | Minnesota Twins | LF | MLB | 2009-2013 | H | Flanagan (Pembroke Pines,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1087 | June-Reg | Kyle Gibson ** | Philadelphia Phillies | P | AAA | 2007-2013 | H | Greenfield-Central (Greenfield,IN) | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1088 | June-Reg | Jean Diaz | Oakland Athletics | 3B | NCAA | 2007-2010 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 36 | 1089 | June-Reg | Johnathan Moore ** | Houston Astros | C | RK | 2008-2011 | H | Lamar (Arlington,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1090 | June-Reg | Samson Williams | Atlanta Braves | OF | - | H | Laney (Wilmington,NC) | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 36 | 1091 | June-Reg | Ryan Miller | Cleveland Indians | P | A+ | 2007-2009 | C | Blinn College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1092 | June-Reg | Alex Fonseca | Los Angeles Angels | SS | A+ | 2004-2009 | C | Florida Atlantic University | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1093 | June-Reg | Darren Blocker | Boston Red Sox | 3B | A- | 2007-2008 | C | Connors State College | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1094 | June-Reg | Jared Rogers ** | New York Yankees | P | AA | 2009-2013 | H | Duncanville (Duncanville,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1095 | June-Reg | Matthew Enuco | Chicago White Sox | 2B | RK | 2006-2006 | C | Rowan University | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 36 | 1096 | June-Reg | Adrian Alaniz ** | St. Louis Cardinals | P | AA | 2005-2011 | C | University of Texas | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |