| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2003 | 48 | 1403 | June-Reg | Derrick Shaw | Tampa Bay Rays | SS | - | H | Benton (Benton,LA) | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1404 | June-Reg | Calvin Thompson | Milwaukee Brewers | OF | - | H | Shaw (East Cleveland,OH) | SF | OH | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1405 | June-Reg | Dusty Ryan | Detroit Tigers | C | MLB | 2004-2011 | C | Merced College | SF | CA | 70 | 3 | 0 | 2 | 11 | 0 | .257 | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1406 | June-Reg | Tom Vincent | San Diego Padres | OF | A | 2003-2005 | C | ?? | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1407 | June-Reg | Zach Weidenaar | Kansas City Royals | OF | - | H | Bozeman (Bozeman,MT) | SF | MT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1408 | June-Reg | Tim Lincecum ** | Chicago Cubs | P | MLB | 2004-2013 | H | Liberty (Renton,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1409 | June-Reg | Cameron McGuire | Baltimore Orioles | C | Ind | 2005-2009 | C | McLennan Community College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1410 | June-Reg | Antonio Westfield | Pittsburgh Pirates | OF | RK | 2004-2005 | H | Cleveland (Cleveland,TN) | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1411 | June-Reg | Ryan Flavell | Colorado Rockies | C | NCAA | 2006-2007 | C | Clarendon College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1412 | June-Reg | Jordan Karnofsky | Cleveland Indians | OF | NCAA | 2004-2007 | H | Christian Brothers (Sacramento,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1413 | June-Reg | Jon Malo | New York Mets | SS | AAA | 2005-2012 | C | Miami-Dade College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1414 | June-Reg | Bryan Hansen | Toronto Blue Jays | P | Ind | 2005-2008 | C | Kishwaukee College | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1415 | June-Reg | Johntavis Character | Cincinnati Reds | OF | RK | 2004-2004 | H | McNair (Atlanta,GA) | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1416 | June-Reg | Mike Alvarez | Chicago White Sox | P | - | H | Monsignor Pace (Miami,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1417 | June-Reg | Ashkelon Stapleton ** | Florida Marlins | P | NCAA | 2005-2007 | C | Mississippi Delta Community College | SF | MS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1418 | June-Reg | Adam Davis | Boston Red Sox | P | - | C | Middle Georgia College | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1419 | June-Reg | Kyle Nash | Philadelphia Phillies | P | - | H | Mater Dei (Santa Ana,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1420 | June-Reg | Markus Roberts | Seattle Mariners | SS | - | H | Deer Valley (Antioch,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1421 | June-Reg | Lance Zawadzki ** | Montreal Expos | SS | MLB | 2004-2013 | H | St. John's (Shrewsbury,MA) | SF | MA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1422 | June-Reg | Jared Swart | Minnesota Twins | P | NCAA | 2006-2006 | H | Cimarron (Lahoma,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1423 | June-Reg | Jeremy Labigang | Anaheim Angels | P | - | H | Westwood (Fort Pierce,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2003 | 48 | 1424 | June-Reg | Kyle Rapp ** | Los Angeles Dodgers | OF | NCAA | 2006-2007 | H | Milford (Milford,OH) | SF | OH | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1425 | June-Reg | Matt Berezay ** | San Francisco Giants | OF | AA | 2005-2008 | C | Modesto Junior College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1426 | June-Reg | Eric Schaler ** | New York Yankees | P | RK | 2004-2012 | H | Cherry Creek (Englewood,CO) | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1427 | June-Reg | Ben Colton | Arizona Diamondbacks | P | NCAA | 2006-2008 | H | Reno (Reno,NV) | SF | NV | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 48 | 1428 | June-Reg | Tony Harris | Atlanta Braves | P | - | C | Surry Community College | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |