| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2003 | 16 | 458 | June-Reg | Jared Hughes ** | Tampa Bay Rays | P | MLB | 2004-2013 | H | Santa Margarita Catholic (Rancho Santa Margarita,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 459 | June-Reg | Mitch Stetter | Milwaukee Brewers | P | MLB | 2002-2013 | C | Indiana State University | SF | IN | 1 | 0 | 0 | 0 | 0 | 0 | .000 | 8 | 2 | 4.08 | 1 | 86 | 89 | 0 |
| 2003 | 16 | 460 | June-Reg | Jordan Tata | Detroit Tigers | P | MLB | 2002-2009 | C | Sam Houston State University | SF | TX | -- | -- | -- | -- | -- | -- | -- | 1 | 1 | 6.91 | 0 | 29 | 14 | 3 |
| 2003 | 16 | 461 | June-Reg | Zane Carlson ** | San Diego Padres | P | A | 2000-2006 | C | Baylor University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 462 | June-Reg | Bryan Graham | Kansas City Royals | OF | A | 2003-2004 | C | William Paterson University of New Jersey | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 463 | June-Reg | Matt Weber | Chicago Cubs | P | A+ | 2003-2006 | H | Boylan Catholic (Rockford,IL) | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 464 | June-Reg | Alan Beck | Baltimore Orioles | OF | A- | 2000-2003 | C | Western Carolina University | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 465 | June-Reg | Justin Harris | Pittsburgh Pirates | SS | A+ | 2002-2006 | C | University of South Carolina | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 466 | June-Reg | Kevin Altman | Texas Rangers | P | A+ | 2003-2011 | H | Rubidoux (Riverside,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 467 | June-Reg | Mike Wiley | Colorado Rockies | P | RK | 2002-2003 | C | Stetson University | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 468 | June-Reg | Aaron Laffey | Cleveland Indians | P | MLB | 2003-2013 | H | Alleghany (Cumberland,MD) | SF | MD | 4 | 0 | 0 | 0 | 0 | 0 | .250 | 25 | 29 | 4.38 | 1 | 474 | 233 | 65 |
| 2003 | 16 | 469 | June-Reg | David Smith | New York Mets | P | A- | 2003-2004 | C | Pfeiffer University | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 470 | June-Reg | Joey Reiman | Toronto Blue Jays | C | A+ | 2003-2006 | C | Grand Canyon University | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 471 | June-Reg | Chris Dickerson | Cincinnati Reds | OF | MLB | 2000-2013 | C | University of Nevada | SF | NV | 518 | 26 | 7 | 11 | 47 | 27 | .266 | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 472 | June-Reg | Cody Dickens | Chicago White Sox | P | NCAA | 2006-2007 | C | Surry Community College | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 473 | June-Reg | Jon Nickerson | Florida Marlins | P | A | 2003-2005 | H | Stanhope Elmore (Millbrook,AL) | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 474 | June-Reg | Kevin Ool | Boston Red Sox | P | AA | 2002-2007 | C | Marist College | SF | NY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 475 | June-Reg | Nathan Cabrera | Philadelphia Phillies | P | A | 2003-2006 | C | Trinidad State Junior College | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 476 | June-Reg | Brian Schweiger | Seattle Mariners | C | AAA | 2003-2006 | C | Cal State San Bernardino | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 477 | June-Reg | Rickey Jenkins | Montreal Expos | P | A- | 2003-2004 | C | University of South Carolina-Aiken | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 478 | June-Reg | Michael Rogers | Minnesota Twins | P | RK | 2004-2004 | H | Del City (Oklahoma City,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 479 | June-Reg | Jamie Merchant | Houston Astros | P | AA | 2002-2007 | C | University of Vermont | SF | VT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 480 | June-Reg | Stantrel Smith | Anaheim Angels | OF | A | 2004-2012 | C | North Florida Community College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 481 | June-Reg | James Peterson | Los Angeles Dodgers | 1B | A | 2004-2007 | C | Indian Hills Community College-Centerville | SF | IA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 482 | June-Reg | Vern Sterry ** | Oakland Athletics | P | AAA | 2001-2007 | C | North Carolina State University | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 483 | June-Reg | Mike Mooney | San Francisco Giants | OF | AAA | 2003-2011 | C | College of San Mateo | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 484 | June-Reg | Heath Castle | New York Yankees | P | A+ | 2003-2006 | C | University of Kentucky | SF | KY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 485 | June-Reg | Omar Pena | St. Louis Cardinals | SS | A+ | 2000-2010 | C | Northeastern University | SF | MA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 486 | June-Reg | Reuben Kerbs | Arizona Diamondbacks | P | A+ | 2002-2005 | C | Wichita State University | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 16 | 487 | June-Reg | Cole Armstrong | Atlanta Braves | C | AAA | 2002-2012 | C | Chipola College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |