| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2001 | 1 | 15 | June-Reg | Gabe Gross | Toronto Blue Jays | OF | MLB | 1999-2010 | C | Auburn University | SF | AL | 1461 | 78 | 8 | 40 | 186 | 22 | .239 | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 2 | 59 | June-Reg | Brandon League | Toronto Blue Jays | P | MLB | 2001-2013 | H | St. Louis (Honolulu,HI) | SF | HI | -- | -- | -- | -- | -- | -- | -- | 19 | 28 | 3.60 | 60 | 415 | 309 | 0 |
| 2001 | 3 | 91 | June-Reg | Tyrell Godwin | Toronto Blue Jays | OF | MLB | 1998-2007 | C | University of North Carolina | SF | NC | 3 | 0 | 0 | 0 | 0 | 0 | .000 | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 4 | 121 | June-Reg | Chris Sheffield | Toronto Blue Jays | P | A- | 1999-2002 | C | University of Miami | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 5 | 151 | June-Reg | Mike Rouse | Toronto Blue Jays | IF | MLB | 2001-2008 | C | Cal State Fullerton | SF | CA | 91 | 4 | 0 | 0 | 6 | 2 | .165 | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 6 | 181 | June-Reg | Lee Delfino | Toronto Blue Jays | IF | A+ | 2001-2005 | C | East Carolina University | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 7 | 211 | June-Reg | Jason Colson | Toronto Blue Jays | P | A+ | 2001-2009 | C | Winthrop University | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 8 | 241 | June-Reg | Sean Grimes | Toronto Blue Jays | P | RK | 2001-2003 | H | Saunders Secondary (London,ON) | SF | ON | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 9 | 271 | June-Reg | Luke Hetherington | Toronto Blue Jays | OF | A+ | 2001-2011 | H | Kentwood (Kent,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 10 | 301 | June-Reg | Ryan Costello | Toronto Blue Jays | P | AA | 2001-2007 | C | Montclair State University | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 11 | 331 | June-Reg | Sean Gamble ** | Toronto Blue Jays | OF | A | 2002-2008 | H | Jefferson Davis (Montgomery,AL) | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 12 | 361 | June-Reg | Ernie Durazo | Toronto Blue Jays | 1B | A | 1999-2003 | C | University of Arizona | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 13 | 391 | June-Reg | Brendan Fuller | Toronto Blue Jays | P | A | 2001-2004 | C | University of South Florida | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 14 | 421 | June-Reg | David Corrente | Toronto Blue Jays | C | AAA | 2001-2008 | H | Chatham-Kent (Chatham,ON) | SF | ON | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 15 | 451 | June-Reg | Nick Thomas | Toronto Blue Jays | P | A- | 2003-2005 | H | Laguna Creek (Elk Grove,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 16 | 481 | June-Reg | Rock Mills ** | Toronto Blue Jays | C | A | 1999-2003 | C | Pepperdine University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 17 | 511 | June-Reg | Chris Neylan | Toronto Blue Jays | P | A- | 2001-2004 | H | Steinert (Trenton,NJ) | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 18 | 541 | June-Reg | Aaron McEachran | Toronto Blue Jays | C | A+ | 1999-2007 | C | University of Northern Iowa | SF | IA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 19 | 571 | June-Reg | Isaac Iorg | Toronto Blue Jays | IF | AA | 2001-2004 | H | Karns (Knoxville,TN) | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 20 | 601 | June-Reg | Jon Ashford | Toronto Blue Jays | H | RK | 2002-2004 | H | Covington (Covington,TN) | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 21 | 631 | June-Reg | Jeff Fiorentino ** | Toronto Blue Jays | MLB | 2002-2012 | H | Nova (Davie,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 22 | 661 | June-Reg | Darren Heal | Toronto Blue Jays | RK | 2000-2001 | C | Oklahoma State University | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 23 | 691 | June-Reg | Garrick Evans ** | Toronto Blue Jays | IF | NCAA | 2002-2005 | H | Lake Braddock (Burke,VA) | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 24 | 721 | June-Reg | Dave Gassner | Toronto Blue Jays | P | MLB | 1998-2009 | C | Purdue University | SF | IN | -- | -- | -- | -- | -- | -- | -- | 1 | 0 | 5.87 | 0 | 8 | 2 | 2 |
| 2001 | 25 | 751 | June-Reg | Mark Comolli | Toronto Blue Jays | P | AAA | 2001-2006 | C | Delaware Technical & Community College | SF | DE | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 26 | 781 | June-Reg | Nick Tempesta | Toronto Blue Jays | SS | A+ | 2001-2004 | C | Eastern Connecticut State University | SF | CT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 27 | 811 | June-Reg | Adam Daniels ** | Toronto Blue Jays | P | AAA | 2005-2010 | C | Eastern Oklahoma State College | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 28 | 841 | June-Reg | Joel Kirsten ** | Toronto Blue Jays | P | AAA | 2002-2011 | C | Pierce College | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 29 | 871 | June-Reg | Mark McDonald | Toronto Blue Jays | P | - | H | M.M. Robinson (Burlington,ON) | SF | ON | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 30 | 901 | June-Reg | Javier Lopez | Toronto Blue Jays | OF | Ind | 2007-2008 | H | Northwest Christian Acade (Miami,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 31 | 931 | June-Reg | Robert Grana ** | Toronto Blue Jays | C | A | 2002-2005 | H | Cimarron Memorial (Las Vegas,NV) | SF | NV | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 32 | 961 | June-Reg | Adam Sanabria | Toronto Blue Jays | NCAA | 2003-2005 | H | Lake Mary (Lake Mary,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 33 | 991 | June-Reg | Kellen Ludwig ** | Toronto Blue Jays | P | A- | 2003-2005 | H | Lee County (Leesburg,GA) | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 34 | 1021 | June-Reg | Robert Ennis | Toronto Blue Jays | P | - | C | Harding University | SF | AR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 35 | 1051 | June-Reg | Nicholas Gor | Toronto Blue Jays | P | A+ | 2004-2004 | C | Saddleback College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 36 | 1081 | June-Reg | Brian McFadden | Toronto Blue Jays | OF | NCAA | 2005-2005 | H | Lake City (Lake City,SC) | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 37 | 1111 | June-Reg | Felix Peguero | Toronto Blue Jays | OF | RK | 2004-2005 | H | Bladensburg (Riverdale,MD) | SF | MD | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 38 | 1141 | June-Reg | Tim Whittaker | Toronto Blue Jays | C | AAA | 2001-2005 | C | University of South Carolina | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 39 | 1171 | June-Reg | Adam Rodgers ** | Toronto Blue Jays | C | A | 2004-2006 | H | Grapevine (Grapevine,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 41 | 1230 | June-Reg | Ryan Olivo | Toronto Blue Jays | NCAA | 2003-2003 | H | Grapevine (Grapevine,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 42 | 1258 | June-Reg | Jared Sanders ** | Toronto Blue Jays | A | 2002-2005 | C | Mount Hood Community College | SF | OR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 43 | 1286 | June-Reg | Paul McDonald | Toronto Blue Jays | P | - | H | M.M. Robinson (Burlington,ON) | SF | ON | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 44 | 1314 | June-Reg | Kevin Johnston | Toronto Blue Jays | P | - | H | Matheson Secondary (Surrey,BC) | SF | BC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 45 | 1342 | June-Reg | Larry Best-Berfet | Toronto Blue Jays | 2B | NCAA | 2004-2004 | C | County College of Morris | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 46 | 1370 | June-Reg | Sean Barker ** | Toronto Blue Jays | OF | MLB | 2002-2008 | C | Louisiana State University | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 47 | 1397 | June-Reg | Chris Jones | Toronto Blue Jays | MLB | 1984-2004 | H | Liverpool (Liverpool,NY) | SF | TX | 1021 | 43 | 11 | 30 | 131 | 26 | .252 | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 48 | 1424 | June-Reg | Scott Shoemaker | Toronto Blue Jays | AAA | 2003-2008 | C | Grossmont College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 49 | 1449 | June-Reg | Kenny Holmberg ** | Toronto Blue Jays | 2B | A+ | 2005-2008 | H | Dunedin (Dunedin,FL) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 50 | 1472 | June-Reg | Floyd Albert | Toronto Blue Jays | P | - | H | Kernahan Park (St. Catharines,ON) | SF | ON | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |