| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1988 | 5 | 110 | June-Reg | Bryce Florie | San Diego Padres | P | MLB | 1988-2007 | H | Hanahan (Hanahan,SC) | SF | SC | 9 | 0 | 0 | 0 | 0 | 0 | .111 | 20 | 24 | 4.47 | 2 | 494 | 395 | 29 |
| 1988 | 5 | 111 | June-Reg | Ty Kovach | Cleveland Indians | P | AA | 1989-1993 | C | Central Arizona College | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 112 | June-Reg | Turk Wendell | Atlanta Braves | P | MLB | 1986-2004 | C | Quinnipiac University | SF | CT | 43 | 0 | 0 | 0 | 0 | 0 | .070 | 36 | 33 | 3.93 | 33 | 646 | 515 | 6 |
| 1988 | 5 | 113 | June-Reg | Steve Nicosia | Baltimore Orioles | OF | A | 1988-1990 | H | Bishop Gallagher (Harper Woods,MI) | SF | MI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 114 | June-Reg | Paul Branconier | Los Angeles Dodgers | P | A | 1988-1991 | H | Covina (Covina,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 115 | June-Reg | Cliff Williams | Texas Rangers | C | A+ | 1988-1993 | H | East St. Louis (East St. Louis,IL) | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 116 | June-Reg | Terry Christopher | Houston Astros | P | A+ | 1991-1992 | H | Moline (null) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1988 | 5 | 117 | June-Reg | Dave Neal | California Angels | P | A+ | 1988-1991 | H | Montgomery (Semmes,AL) | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 118 | June-Reg | John Salles | Chicago Cubs | P | AAA | 1988-1993 | C | Fresno State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 119 | June-Reg | Joey Eischen ** | Chicago White Sox | P | MLB | 1989-2006 | H | West Covina (West Covina,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 120 | June-Reg | Mickey Morandini | Philadelphia Phillies | SS | MLB | 1989-2000 | C | Indiana University | SF | IN | 4558 | 209 | 54 | 32 | 351 | 123 | .268 | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 121 | June-Reg | John Valentin | Boston Red Sox | SS | MLB | 1988-2002 | C | Seton Hall University | SF | NJ | 3917 | 281 | 17 | 124 | 558 | 47 | .279 | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 122 | June-Reg | Darryl Ratliff | Pittsburgh Pirates | OF | AAA | 1989-1999 | H | Santa Cruz (Santa Cruz,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 123 | June-Reg | Willie Romay | Seattle Mariners | OF | A+ | 1989-1994 | H | Miami Senior (Miami,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 124 | June-Reg | K.C. Gillum | Cincinnati Reds | 3B | AA | 1988-1993 | H | Westerville North (Westerville,OH) | SF | OH | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 125 | June-Reg | Joe Grahe ** | Oakland Athletics | P | MLB | 1990-2000 | C | University of Miami | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 126 | June-Reg | Eddie Tucker | San Francisco Giants | C | MLB | 1988-1996 | C | Delta State University | SF | MS | 103 | 2 | 0 | 1 | 7 | 1 | .126 | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 127 | June-Reg | Tim Spehr | Kansas City Royals | OF | MLB | 1988-2001 | C | Arizona State University | SF | AZ | 556 | 31 | 1 | 19 | 72 | 9 | .198 | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 128 | June-Reg | Tyrone Woods | Montreal Expos | 3B | AAA | 1988-2008 | H | Hernando (Brooksville,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 129 | June-Reg | Steve Dean | Minnesota Twins | OF-P | NCAA | 1989-1992 | H | Ada (Ada,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 130 | June-Reg | Tim Howard | New York Mets | 2B | AAA | 1988-2002 | C | Imperial Valley College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 131 | June-Reg | Don Sparks | New York Yankees | 3B | AAA | 1982-1996 | C | Loyola Marymount University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 132 | June-Reg | Lee Plemel | St. Louis Cardinals | P | AA | 1988-1992 | C | Stanford University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 133 | June-Reg | Pat Listach | Milwaukee Brewers | SS | MLB | 1988-1998 | C | Arizona State University | SF | AZ | 1772 | 63 | 13 | 5 | 143 | 116 | .251 | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 134 | June-Reg | B.J. Parese | Toronto Blue Jays | SS | A+ | 1988-1991 | H | Owasso (Owasso,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1988 | 5 | 135 | June-Reg | Mike Lumley | Detroit Tigers | P | AAA | 1988-1993 | C | Eastern Michigan University | SF | MI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |