| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1986 | 2 | 27 | Jan-Reg | Mike Walker | Cleveland Indians | P | MLB | 1987-1999 | C | Seminole State College of Florida | SF | FL | 3 | 0 | 0 | 0 | 0 | 0 | .000 | 3 | 11 | 5.09 | 2 | 161 | 76 | 12 |
| 1986 | 2 | 28 | Jan-Reg | David Rose | Pittsburgh Pirates | P | - | C | South Georgia College | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 29 | Jan-Reg | Heath Lane ** | Texas Rangers | P | A+ | 1988-1990 | C | San Joaquin Delta College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 30 | Jan-Reg | Jimmy Jones | San Francisco Giants | IF | MLB | 1982-1993 | C | Linn-Benton Community College | SF | OR | 193 | 2 | 0 | 2 | 11 | 0 | .166 | 43 | 39 | 4.46 | 0 | 755 | 376 | 118 |
| 1986 | 2 | 31 | Jan-Reg | Reid Gunter ** | Milwaukee Brewers | P | RK | 1987-1987 | C | Sacramento City College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 32 | Jan-Reg | Richard Longuil | Atlanta Braves | P | A+ | 1986-1990 | C | Iowa Western Community College | SF | IA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 33 | Jan-Reg | Jim Blueberg | Seattle Mariners | P | AA | 1986-1991 | C | Yuba Community College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 34 | Jan-Reg | Steve Scarsone | Philadelphia Phillies | IF | MLB | 1986-1999 | C | Santiago Canyon College | SF | CA | 830 | 44 | 4 | 20 | 86 | 7 | .239 | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 35 | Jan-Reg | Larry Johnson | Minnesota Twins | IF | - | C | Taft College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 36 | Jan-Reg | Jerome Walton | Chicago Cubs | OF | MLB | 1986-2001 | C | Enterprise-Ozark Community College | SF | AL | 1573 | 77 | 8 | 25 | 132 | 58 | .269 | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 37 | Jan-Reg | Jeff Kipila ** | Oakland Athletics | P | AAA | 1988-1994 | C | Brookdale Community College | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 38 | Jan-Reg | Brian Wood | San Diego Padres | P | AAA | 1986-1993 | C | Middle Georgia College | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 39 | Jan-Reg | Curt Schilling | Boston Red Sox | P | MLB | 1986-2007 | C | Yavapai College | SF | AZ | 773 | 13 | 1 | 0 | 29 | 1 | .151 | 216 | 146 | 3.46 | 22 | 3261 | 3116 | 436 |
| 1986 | 2 | 40 | Jan-Reg | Sam August | Houston Astros | P | AA | 1986-1994 | C | Orange County Community College | SF | NY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 41 | Jan-Reg | Jaime Navarro ** | Baltimore Orioles | P | MLB | 1987-2003 | C | Miami-Dade College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 42 | Jan-Reg | Mark Helms | Montreal Expos | C | - | C | Panola College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 43 | Jan-Reg | Hank Lott | Detroit Tigers | P | A- | 1986-1997 | H | Kenwood Academy (Chicago,IL) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 44 | Jan-Reg | Bill Dodd | Cincinnati Reds | P | AA | 1986-1991 | C | Saddleback College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 45 | Jan-Reg | Mike Todd | Chicago White Sox | 1B | - | C | San Bernardino Valley College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 46 | Jan-Reg | Brian Flanagan | Los Angeles Dodgers | OF | - | C | Citrus College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 47 | Jan-Reg | Scott Kannenberg | California Angels | P | A+ | 1986-1988 | C | San Diego State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 48 | Jan-Reg | Carl Jones-Pointer | New York Mets | OF | A | 1986-1988 | C | Mount San Antonio College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 49 | Jan-Reg | Kevin Knutson | Kansas City Royals | 1B | - | C | Big Bend Community College | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 50 | Jan-Reg | Bret Barberie ** | St. Louis Cardinals | IF | MLB | 1989-1998 | C | Cerritos College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 51 | Jan-Reg | Dean Wilkins | New York Yankees | P | MLB | 1986-1993 | C | San Diego Mesa College | SF | CA | 2 | 0 | 0 | 0 | 0 | 0 | .000 | 3 | 1 | 7.55 | 2 | 31 | 21 | 0 |
| 1986 | 2 | 52 | Jan-Reg | Lindsay Foster | Toronto Blue Jays | IF | AAA | 1986-1994 | C | Louisburg College | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |