| 1 | 8 | June-Reg | Gordon Beckham | SS | 21 | 6-0 | 175 | R | R | MLB | 2009-2009 | University of Georgia | $2,600,000 |
| 3 | 86 | June-Reg | Brent Morel | 3B | 21 | 6-1 | 220 | R | R | A+ | | Cal Poly | $440,000 |
| 4 | 120 | June-Reg | Drew O'Neil | P | 22 | 6-3 | 200 | R | R | A | | Penn State University | $260,000 |
| 5 | 150 | June-Reg | Dan Hudson | P | 21 | 6-4 | 215 | R | R | AAA | | Old Dominion University | $180,000 |
| 6 | 180 | June-Reg | Ken Williams | OF | 22 | 6-0 | 180 | B | R | A | | Wichita State University | $150,000 |
| 7 | 210 | June-Reg | Jordan Danks | OF | 21 | 6-5 | 210 | L | R | AA | | University of Texas | $525,000 |
| 8 | 240 | June-Reg | Kevin Dubler | C | 21 | 6-1 | 200 | L | R | Rookie | | Illinois State University | $105,000 |
| 9 | 270 | June-Reg | Ryan Strauss | OF | 22 | 6-2 | 200 | R | R | Rookie | | Florida State University | $30,000 |
| 10 | 300 | June-Reg | Stephen Sauer | P | 21 | 6-2 | 180 | R | R | A | | Arizona State University | $72,500 |
| 11 | 330 | June-Reg | Charles Leesman | P | 21 | 6-4 | 210 | L | L | A | | Xavier University | |
| 12 | 360 | June-Reg | Steven Upchurch | P | 18 | 6-5 | 190 | R | R | Rookie | | Faith Academy (Mobile,AL) | |
| 13 | 390 | June-Reg | Dexter Carter | P | 21 | 6-6 | 195 | R | R | A | | Old Dominion University | |
| 14 | 420 | June-Reg | Jorden Merry | P | 21 | 6-1 | 190 | R | R | Rookie | | University of Washington | |
| 15 | 450 | June-Reg | Tyler Kuhn | SS | 21 | 5-10 | 185 | L | R | A+ | | West Virginia University | |
| 16 | 480 | June-Reg | Brett Basham | C | 21 | 6-2 | 205 | R | R | Rookie | | University of Mississippi | |
| 17 | 510 | June-Reg | Jonathan Weaver | P | 18 | 6-3 | 185 | R | R | - | | East Leyden (Franklin Park,IL) | |
| 18 | 540 | June-Reg | Josh Billeaud | P | 21 | 6-3 | 210 | R | R | Rookie | | University of Southern Mississippi | |
| 19 | 570 | June-Reg | Justin Kuehn | P | 21 | 6-2 | 190 | R | R | Rookie | | Santa Clara University | |
| 20 | 600 | June-Reg | Justin Greene | OF | 22 | 6-0 | 185 | R | R | A+ | | Francis Marion University | |
| 21 | 630 | June-Reg | Drew Garcia | 2B | 22 | 6-0 | 175 | B | R | A | | University of California-Riverside | |
| 22 | 660 | June-Reg | Jose Vargas | 3B | 20 | 6-3 | 225 | R | R | A | | Ventura College | |
| 23 | 690 | June-Reg | Kyle Long | P | 19 | 6-7 | | L | L | - | | St. Anne's Belfield (Charlottesville,VA) | |
| 24 | 720 | June-Reg | Brett Graffy | P | 21 | 6-2 | 195 | R | R | Rookie | | University of Notre Dame | |
| 25 | 750 | June-Reg | Taylor Thompson | P | 21 | 6-5 | 225 | R | R | AAA | | Auburn University | |
| 26 | 780 | June-Reg | Jorge Castillo | 1B | 21 | 6-2 | 225 | L | R | A | | Florida International University | |
| 27 | 810 | June-Reg | Doug Thennis | 1B | 22 | 6-3 | 210 | R | R | Rookie | | Texas Tech University | |
| 28 | 840 | June-Reg | Brandon Short | OF | 19 | 6-1 | 195 | R | R | A | | St. Johns River Community College | |
| 29 | 870 | June-Reg | Randall Thorpe | OF | 19 | 6-0 | 170 | R | R | - | | Heritage (Colleyville,TX) | |
| 30 | 900 | June-Reg | Kevin Asselin | P | 23 | 6-1 | 180 | R | R | AAA | | Sonoma State University | |
| 31 | 930 | June-Reg | James McCann | C | 18 | 6-2 | 185 | B | R | - | | Dos Pueblos (Goleta,CA) | |
| 32 | 960 | June-Reg | Concepcion Marrero | 2B | 19 | 5-11 | 190 | R | R | - | | Reynoldsburg (Reynoldsburg,OH) | |
| 33 | 990 | June-Reg | Eddie Young | IF | 18 | 5-11 | 180 | L | R | - | | Christian (El Cajon,CA) | |
| 34 | 1020 | June-Reg | Marcus Semien | SS | 17 | 6-0 | 175 | R | R | College | | St. Mary's (Berkeley,CA) | |
| 35 | 1050 | June-Reg | Harold Riggins | 1B | 18 | 6-2 | 235 | R | R | - | | Normal West (Normal,IL) | |
| 36 | 1080 | June-Reg | Jordan Keegan | OF | 18 | 6-0 | 175 | L | L | - | | Silverado (Las Vegas,NV) | |
| 37 | 1110 | June-Reg | Terry Doyle | P | 22 | 6-4 | 225 | R | R | Rookie | | Boston College | |
| 38 | 1140 | June-Reg | Steve Domecus | C | 21 | 6-3 | 220 | R | R | College | | Moorpark College | |
| 39 | 1170 | June-Reg | Rusty Shellhorn | P | 18 | 5-10 | 170 | L | L | - | | Central Valley (Spokane Valley,WA) | |
| 40 | 1200 | June-Reg | Mark Hawkenson | P | 18 | 6-2 | 185 | R | R | - | | Red Mountain (Mesa,AZ) | |
| 41 | 1230 | June-Reg | Mason Radeke | P | 18 | 6-1 | 175 | R | R | College | | Santa Barbara City College | |
| 42 | 1260 | June-Reg | Steven Sabatino | P | 18 | 6-2 | | L | L | - | | Lockport Township (Lockport,IL) | |
| 43 | 1290 | June-Reg | Cory Farris | C | 18 | 6-0 | 190 | L | R | College | | Boone County (Florence,KY) | |
| 44 | 1320** | June-Reg | C.J. Cron | C | 18 | 6-3 | 230 | R | R | College | | Mountain Pointe (Phoenix,AZ) | |
| 45 | 1349 | June-Reg | Julian Kenner | SS | 18 | 6-0 | 185 | R | R | - | | Whitney Young (Chicago,IL) | |
| 46 | 1377 | June-Reg | Lee Fisher | SS | 21 | 6-0 | 175 | R | R | - | | University of Missouri | |
| 47 | 1404 | June-Reg | Dan Hayden | C | 24 | 5-10 | 220 | R | R | College | | Xavier University | |
| 48 | 1431 | June-Reg | Ricardo Alvarez | 2B | 17 | 5-5 | 150 | R | R | - | | San Fernando (San Fernando,CA) | |
| 49 | 1458 | June-Reg | Travis Otto | 1B | 18 | '6-6 | 210 | R | R | - | | Wheaton North (Wheaton,IL) | |
| 50 | 1485 | June-Reg | Steven Florence | SS | 17 | 5-11 | 150 | R | R | - | | Simeon (Chicago,IL) | |