| 1 | 3 | June-Reg | Philip Humber | P | 21 | 6-4 | 210 | R | R | MLB | 2006-2009 | Rice University | $3,700,000 |
| 2 | 44 | June-Reg | Matt Durkin | P | 21 | 6-4 | 220 | R | R | A | | San Jose State University | $800,000 |
| 3 | 74 | June-Reg | Gaby Hernandez | P | 18 | 6-3 | 215 | R | R | AAA | | Belen Jesuit (Miami,FL) | $480,000 |
| 4 | 104 | June-Reg | Aaron Hathaway | C | 21 | 6-0 | 190 | R | R | A+ | | University of Washington | $362,500 |
| 5 | 134 | June-Reg | Nick Evans | 3B | 18 | 6-2 | 180 | R | R | MLB | 2008-2009 | St. Mary's (Phoenix,AZ) | $217,500 |
| 6 | 164 | June-Reg | Ryan Coultas | SS | 22 | 6-3 | 180 | R | R | AA | | University of California-Davis | $135,000 |
| 7 | 194 | June-Reg | Scott Hyde | P | 21 | 6-5 | 215 | R | R | A- | | George Fox University | $145,000 |
| 8 | 224** | June-Reg | Neil Jamison | P | 20 | 6-3 | 185 | R | R | AA | | Long Beach State University | |
| 9 | 254 | June-Reg | Mike Carp | 1B | 18 | 6-2 | 205 | L | R | MLB | 2009-2009 | Lakewood (Lakewood,CA) | $60,000 |
| 10 | 284 | June-Reg | Brahiam Maldonado | OF | 18 | 6-0 | 185 | R | R | A+ | | St. Francis (Carolina,PR) | $62,500 |
| 11 | 314 | June-Reg | Joshua Wyrick | OF | 22 | 6-3 | 190 | L | L | A | | Porterville College | |
| 12 | 344 | June-Reg | Jeff Landing | P | 20 | 6-3 | 190 | R | R | A | | Virginia Tech | |
| 13 | 374 | June-Reg | Martinez Allen | OF | | | | | | - | | Dunnellon (Dunnellon,FL) | |
| 14 | 404 | June-Reg | Brad Meyers | P | 18 | 6-6 | 195 | R | R | AA | | Servite (Anaheim,CA) | |
| 15 | 434 | June-Reg | Grant Psomas | SS | 21 | 6-3 | 195 | R | R | AAA | | West Virginia University | |
| 16 | 464 | June-Reg | Parris Austin | OF | 18 | 6-2 | 185 | R | R | A | | Douglas County (Douglasville,GA) | |
| 17 | 494 | June-Reg | Joe Williams | P | 23 | 6-2 | 220 | L | L | AA | | Saint Xavier University | |
| 18 | 524 | June-Reg | Kyle Brown | OF | 22 | 6-0 | 187 | R | R | A | | Le Moyne College | |
| 19 | 554 | June-Reg | Jim Burt | 1B | 23 | 5-11 | 217 | R | L | A | | University of Miami | |
| 20 | 584 | June-Reg | Sean Henry | SS | 18 | 5-10 | 154 | R | R | AA | | Diablo Valley College | |
| 21 | 614** | June-Reg | Tim Smith | OF | 18 | 6-3 | 225 | L | L | AA | | Birchmount Park (Scarborough,ON) | |
| 22 | 644 | June-Reg | Caleb Stewart | OF | 22 | 6-2 | 230 | R | R | AAA | | University of Kentucky | |
| 23 | 674 | June-Reg | Michael Devaney | P | 21 | 6-4 | 220 | R | R | AA | | Concordia University | |
| 24 | 704 | June-Reg | Bryan Zech | 2B | 23 | 5-10 | 175 | R | R | A- | | Florida State University | |
| 25 | 734 | June-Reg | Jonathan Castillo | P | 20 | 5-11 | 195 | R | R | A+ | | Miami-Dade College | |
| 26 | 764 | June-Reg | Rafael Arroyo | C | 21 | 5-8 | 175 | R | R | AAA | | Cal State Los Angeles | |
| 27 | 794 | June-Reg | Bryant Suggs | OF | 20 | 5-9 | 160 | L | L | Rookie | | Hillsborough Community College | |
| 28 | 824 | June-Reg | Armand Gaerlan | SS | 21 | 5-10 | 170 | R | R | A+ | | University of San Francisco | |
| 29 | 854 | June-Reg | Mike Swindell | P | 22 | 6-1 | 195 | R | R | AA | | University of Oklahoma | |
| 30 | 884 | June-Reg | Blake Eager | P | 22 | 6-3 | 205 | R | R | AA | | Metropolitan State College of Denver | |
| 31 | 914 | June-Reg | Erin Jones | P | | | | | | College | | Francis Marion University | |
| 32 | 944 | June-Reg | Jason James | OF | 19 | 5-10 | 175 | L | L | Ind | | Kishwaukee College | |
| 33 | 974 | June-Reg | Mark Fisher | 2B | | 6-3 | 195 | R | R | College | | University of California-Irvine | |
| 34 | 1004 | June-Reg | Jeremiah Lokken | OF | | | | | | College | | Eagle View Academy (Jacksonville,FL) | |
| 35 | 1034 | June-Reg | Garrett Halloran | P | | | | | | - | | Central Arizona College | |
| 36 | 1064 | June-Reg | Jake Harrington | P | 19 | 6-6 | 210 | R | R | Rookie | | Northeastern Junior College | |
| 37 | 1094 | June-Reg | Brad Burns | P | 18 | 6-4 | 182 | R | R | A+ | | Lookeba Sickles (Gracemont,OK) | |
| 38 | 1124 | June-Reg | Zack Sterner | P | 18 | 6-1 | 180 | R | R | A+ | | Franklin Area (Franklin,PA) | |
| 39 | 1154** | June-Reg | Bryan Lee | P | 19 | 6-5 | 200 | R | R | Rookie | | Cuesta College | |
| 40 | 1184 | June-Reg | Julio Rodriguez | OF | | | | | | Rookie | | Manuel Mendez Liceaga (San Juan,PR) | |
| 41 | 1214 | June-Reg | Jacob Ruckle | P | 18 | 6-1 | 180 | R | R | AA | | Mohave (Bullhead City,AZ) | |
| 42 | 1243** | June-Reg | Jim Brauer | P | 21 | 6-4 | 205 | R | R | AA | | University of Michigan | |
| 43 | 1272 | June-Reg | Ian Thurman-Kelly | P | | | | | | - | | Eastern New Mexico University | |
| 44 | 1301 | June-Reg | Lance Scoggins | P | 19 | 6-1 | 165 | L | L | College | | Northwest Florida State College | |
| 45 | 1330 | June-Reg | Daniel McDonald | P | | | | | | - | | Morris Hills (Rockaway,NJ) | |
| 46 | 1359** | June-Reg | Jeremy Hefner | P | 18 | 6-4 | | R | R | AAA | | Perkins Tryon (Perkins,OK) | |
| 47 | 1388** | June-Reg | Ryan Paul | P | 19 | 6-6 | 225 | L | L | A+ | | Los Angeles Pierce College | |
| 48 | 1417 | June-Reg | Morgan Carlile | P | | | | | | - | | Three Oaks (Summerside,PE) | |
| 49 | 1445 | June-Reg | Daniel Buller | P | 19 | 6-1 | 215 | R | L | A | | Fresno City College | |
| 50 | 1473 | June-Reg | Sean Cunningham | P | 17 | 6-6 | 190 | R | L | - | | Bullard (Fresno,CA) | |