| 1 | 3 | June-Reg | Kyle Sleeth | P | 21 | 6-5 | 205 | R | R | AA | | Wake Forest University | $3,350,000 |
| 2 | 40 | June-Reg | Jay Sborz | P | 18 | 6-4 | 210 | R | R | AAA | | Langley (McLean,VA) | $865,000 |
| 3 | 70 | June-Reg | Tony Giarratano | SS | 20 | 6-0 | 180 | B | R | MLB | 2005-2005 | Tulane University | $500,000 |
| 4 | 100 | June-Reg | Josh Rainwater | P | 18 | 6-1 | 220 | R | R | AAA | | DeRidder (DeRidder,LA) | $300,000 |
| 5 | 130 | June-Reg | Danny Zell | P | 21 | 6-5 | 210 | L | L | AA | | University of Houston | $210,000 |
| 6 | 160 | June-Reg | Cody Collet | C | 18 | 6-0 | 195 | R | R | AA | | Newbury Park (Newbury Park,CA) | $200,000 |
| 7 | 190 | June-Reg | Virgil Vasquez | P | 21 | 6-3 | 205 | R | R | MLB | 2007-2009 | University of California-Santa Barbara | $132,500 |
| 8 | 220** | June-Reg | Adam Trent | P | 18 | 6-5 | 180 | R | R | - | | Ooltewah (Ooltewah,TN) | |
| 9 | 250 | June-Reg | Eric Rodland | 2B | 23 | 6-1 | 180 | L | R | AA | | Gonzaga University | $20,000 |
| 10 | 280** | June-Reg | Sean Henry | OF | 17 | 5-10 | 154 | R | R | AA | | Armijo (Fairfield,CA) | |
| 11 | 310 | June-Reg | Brian Rogers | P | 20 | 6-3 | 190 | R | R | MLB | 2006-2007 | Georgia Southern University | |
| 12 | 340 | June-Reg | Jeramy Laster | OF | 18 | 6-1 | 185 | R | R | A+ | | Hunters Lane (Nashville,TN) | |
| 13 | 370 | June-Reg | Michael Brown | OF | 22 | 6-0 | 195 | R | R | College | | College of William and Mary | |
| 14 | 400 | June-Reg | Luis Sabino | OF | 20 | 6-2 | 190 | B | R | A | | Wabash Valley College | |
| 15 | 430 | June-Reg | Andy Baldwin | P | 21 | 6-2 | 190 | R | R | A+ | | Western Kentucky University | |
| 16 | 460 | June-Reg | Jordan Tata | P | 21 | 6-6 | 220 | R | R | MLB | 2006-2007 | Sam Houston State University | |
| 17 | 490 | June-Reg | Ronnie Martin | P | 18 | 6-3 | 195 | L | L | - | | St. Marys (St. Louis,MO) | |
| 18 | 520** | June-Reg | Josh Wahpepah | P | 18 | 6-4 | 185 | R | R | AA | | Cowley College | |
| 19 | 550 | June-Reg | Andrew Graham | C | 21 | 6-4 | 215 | R | R | AAA | | Armstrong Atlantic State University | |
| 20 | 580 | June-Reg | Nick McIntyre | 2B | 22 | 5-10 | 195 | B | R | AA | | Purdue University | |
| 21 | 610 | June-Reg | Jake Ford | 3B | 22 | 6-0 | 220 | R | R | A- | | Spalding University | |
| 22 | 640 | June-Reg | Richie Burgos | 1B | 21 | 6-0 | 190 | L | R | A | | Cal State Fullerton | |
| 23 | 670 | June-Reg | Bobby Huddleston | C | 23 | 6-1 | 235 | R | R | A- | | Auburn University | |
| 24 | 700 | June-Reg | Chris Homer | P | 22 | 6-0 | 185 | R | R | AA | | Marist College | |
| 25 | 730 | June-Reg | Nathan Doyle | SS | 22 | 6-1 | 195 | R | R | A+ | | James Madison University | |
| 26 | 760 | June-Reg | Lavon Lewis | P | 19 | 6-4 | 205 | R | R | A | | Northeastern Oklahoma A&M College | |
| 27 | 790 | June-Reg | Aaron McRae | C | 23 | 6-2 | 203 | L | R | A- | | Louisiana State University in Shreveport | |
| 28 | 820** | June-Reg | Steven Alexander | 1B | 18 | 6-4 | 220 | R | R | Ind | | Rocklin (Rocklin,CA) | |
| 29 | 850 | June-Reg | Kelly Hunt | 1B | 22 | 6-5 | 240 | R | R | AA | | Bowling Green State University | |
| 30 | 880 | June-Reg | Anthony Tomey | P | 21 | 6-4 | 245 | R | R | AAA | | Eastern Michigan University | |
| 31 | 910 | June-Reg | Justin Justice | OF | 18 | 6-0 | 175 | L | L | AA | | Tavares (Tavares,FL) | |
| 32 | 940 | June-Reg | Justin Barnes | C | 22 | 6-3 | 200 | R | R | A+ | | University of Alabama-Huntsville | |
| 33 | 970 | June-Reg | Kenon Ronz | P | 22 | 5-11 | 185 | L | L | A | | Harvard University | |
| 34 | 1000 | June-Reg | Chaz Schilens | OF | 17 | 6-4 | 190 | R | R | - | | Highland (Gilbert,AZ) | |
| 35 | 1030 | June-Reg | Ryan Muller | P | 19 | 6-1 | 165 | | R | College | | Live Oak (Morgan Hill,CA) | |
| 36 | 1060 | June-Reg | John McGorty | 1B | 22 | 6-1 | 195 | L | L | A- | | Marist College | |
| 37 | 1090** | June-Reg | Cirilo Cruz | 3B | 18 | 6-2 | 215 | R | R | A- | | Chandler (Chandler,AZ) | |
| 38 | 1120 | June-Reg | John Juergens | C | 18 | 6-1 | 210 | R | R | - | | Bradley-Bourbonnais (Bradley,IL) | |
| 39 | 1150 | June-Reg | Dustin Richardson | P | 19 | 6-5 | 195 | L | L | MLB | 2009-2009 | Cowley College | |
| 40 | 1180 | June-Reg | Emmanuel Vazquez | P | 18 | 6-2 | 220 | R | R | - | | Nicolas Rodriguez-Barri (Nicolas Rodriguez-Barri,Corozal,PR) | |
| 41 | 1210 | June-Reg | Ezequiel Perez | P | 21 | 6-1 | 185 | R | R | A+ | | Missouri Baptist University | |
| 42 | 1239 | June-Reg | Daniel Spring | P | 22 | 6-2 | 190 | R | R | Rookie | | Brown University | |
| 43 | 1268 | June-Reg | Brian Santo | P | 22 | 6-8 | 240 | R | R | A | | Mount Saint Mary College | |
| 44 | 1296 | June-Reg | Kurt Piantek | 1B | 22 | 6-3 | 215 | R | R | A | | Trinity College | |
| 45 | 1324 | June-Reg | Joshua Tarnow | C | 18 | 6-0 | 180 | R | R | AAA | | Corona del Sol (Tempe,AZ) | |
| 46 | 1351 | June-Reg | Clay Britton | OF | | | | | | College | | Canyon (Canyon Country,CA) | |
| 47 | 1378 | June-Reg | Travis Simmons | 3B | 19 | 6-2 | 180 | R | R | - | | Cleveland State Community College | |
| 48 | 1405 | June-Reg | Dusty Ryan | C | 18 | 6-4 | 230 | R | R | MLB | 2008-2009 | Merced College | |
| 49 | 1431 | June-Reg | Reese Baez | P | 22 | 5-11 | 190 | R | R | A- | | Northwood University | |
| 50 | 1457 | June-Reg | Brandon McCormick | P | 19 | 6-9 | 210 | R | R | - | | Spartanburg Methodist College | |