| 1 | 10 | June-Reg | Chris Burke | IF | 21 | 5-11 | 183 | R | R | MLB | 2004-2009 | University of Tennessee | $1,875,000 |
| 2 | 54 | June-Reg | Mike Rodriguez | OF | 20 | 5-10 | 162 | L | L | AAA | | University of Miami | $675,000 |
| 3 | 86 | June-Reg | Kirk Saarloos | P | 22 | 6-0 | 185 | R | R | MLB | 2002-2008 | Cal State Fullerton | $455,000 |
| 4 | 116 | June-Reg | Philip Barzilla | P | 22 | 6-0 | 180 | L | L | MLB | 2006-2006 | Rice University | $125,000 |
| 5 | 146 | June-Reg | Charlton Jimerson | OF | 21 | 6-3 | 205 | R | R | MLB | 2005-2008 | University of Miami | $90,000 |
| 6 | 176 | June-Reg | Russ Rohlicek | P | 21 | 6-5 | 220 | R | L | AAA | | Long Beach State University | $128,500 |
| 7 | 206 | June-Reg | Ryan Stegall | IF | 21 | 6-1 | 190 | R | R | AAA | | University of Missouri | $89,000 |
| 8 | 236 | June-Reg | Brooks Conrad | IF | 21 | 5-11 | 185 | B | R | MLB | 2008-2009 | Arizona State University | $75,000 |
| 9 | 266 | June-Reg | Kerry Hodges | OF | 21 | 6-2 | 202 | R | R | AA | | Texas Tech University | $60,000 |
| 10 | 296** | June-Reg | Lance Cormier | P | 20 | 6-1 | 190 | R | R | MLB | 2004-2009 | University of Alabama | |
| 11 | 326 | June-Reg | D.J. Houlton | P | 21 | 6-4 | 220 | R | R | MLB | 2005-2007 | University of the Pacific | |
| 12 | 356 | June-Reg | Chris Little | P | 19 | 6-3 | 180 | R | R | A- | | St. Martin's University | |
| 13 | 386 | June-Reg | Kendall Jones | C | 20 | 6-2 | 205 | R | R | A- | - | Texarkana College | |
| 14 | 416 | June-Reg | Clint Hoover | IF | 22 | 6-2 | 190 | R | R | A- | | University of California | |
| 15 | 446 | June-Reg | Trevor Mote | IF | 21 | 6-1 | 190 | B | R | A+ | | Baylor University | |
| 16 | 476 | June-Reg | Brian Rodaway | P | 22 | 6-3 | 190 | L | L | A+ | | University of Nebraska | |
| 17 | 506 | June-Reg | Tom Bayrer | P | 21 | 6-4 | 205 | R | R | A | | Campbell University | |
| 18 | 536 | June-Reg | Joey DeLeon | P | 18 | 5-11 | 180 | R | R | A | | Nixon-Smiley (Nixon,TX) | |
| 19 | 566 | June-Reg | Ryan Kochen | IF | 22 | 6-2 | 195 | R | R | A+ | | Western Michigan University | |
| 20 | 596 | June-Reg | Mark Obradovich | C | 20 | 6-2 | 190 | B | R | AA | - | Gadsden State Community College | |
| 21 | 626 | June-Reg | Jeff Derrickson | C | 18 | 6-3 | 205 | R | R | - | | Bryan Station (Lexington,KY) | |
| 22 | 656 | June-Reg | Justin Humphries | C | 18 | 6-4 | 225 | R | R | A+ | | Episcopal (Bellaire,TX) | |
| 23 | 686 | June-Reg | Matt Albers | P | 18 | 6-0 | 195 | L | R | MLB | 2006-2009 | Clements School (Sugar Land,TX) | |
| 24 | 716 | June-Reg | Cameron Likely | OF | 23 | 5-10 | 170 | R | R | A+ | | University of South Alabama | |
| 25 | 746 | June-Reg | Chad Durham | P | 22 | 6-2 | 190 | R | R | A- | | Texas Christian University | |
| 26 | 776 | June-Reg | Steven Checksfield | OF | 22 | 6-3 | 225 | R | R | A+ | | Albany (Albany,NY) | |
| 27 | 806 | June-Reg | Henry Colbert | P | 19 | 6-3 | 180 | R | R | A- | | Columbia Basin College | |
| 28 | 836 | June-Reg | Seth Bobbitt | P | 22 | 6-1 | 180 | R | R | AA | | Birmingham-Southern College | |
| 29 | 866** | June-Reg | Raymar Diaz | OF | 17 | 6-7 | 190 | R | R | A+ | | Luis Hernaiz Verone (Canovanas,PR) | |
| 30 | 896 | June-Reg | Jjallil Sandoval | IF | 21 | 5-10 | 180 | B | R | A- | - | Cal State Los Angeles | |
| 31 | 926 | June-Reg | Brian Middleton | P | 22 | 6-2 | 200 | R | R | A | | West Virginia State University | |
| 32 | 956 | June-Reg | Billy Jacobson | | 22 | 6-2 | 190 | R | R | Rookie | | Rice University | |
| 33 | 986 | June-Reg | John Fagan | IF | 21 | 6-5 | 205 | R | R | AA | | San Jose State University | |
| 34 | 1016 | June-Reg | Brandon Macchi | OF | 21 | 6-0 | 180 | B | L | A- | | San Jose State University | |
| 35 | 1046 | June-Reg | Travis Teeter | P | 20 | 6-1 | 210 | R | R | A+ | | Rensselaer Polytechnic Institute | |
| 36 | 1076 | June-Reg | Andrew Perry | P | 22 | 6-5 | 220 | R | R | A- | | Cal Poly | |
| 37 | 1106** | June-Reg | Jared Gothreaux | P | 21 | 6-0 | 205 | R | R | AAA | | McNeese State University | |
| 38 | 1136** | June-Reg | Ryan McKeller | P | 17 | 6-5 | 210 | R | R | AAA | | Pflugerville (Pflugerville,TX) | |
| 39 | 1166 | June-Reg | Paul Hazeres | P | | | 0 | | | - | | Carolina Forest (Myrtle Beach,SC) | |
| 40 | 1196 | June-Reg | Osvaldo Diaz | P-3B | 18 | 6-2 | 210 | R | R | Ind | | | |
| 41 | 1225 | June-Reg | Christopher Saywers | P-SS | | | 0 | | | - | | Edmonds Community College | |
| 42 | 1254 | June-Reg | Patrick Wells | P | | | 0 | | | Ind | | West Jordan (West Jordan,UT) | |
| 43 | 1282 | June-Reg | James McNair | P | 22 | 6-4 | 205 | R | R | A | | Virginia Commonwealth University | |
| 44 | 1310** | June-Reg | Lance Dawkins | SS | 19 | 6-3 | 190 | R | R | A- | | Meridian Community College | |
| 45 | 1338** | June-Reg | Kyle Thompson | P | | | 0 | | | - | | Valley Center (Escondido,CA) | |
| 46 | 1366 | June-Reg | Justin Ard | RF | 18 | 6-5 | 205 | B | R | - | | Clear Lake (Houston,TX) | |
| 47 | 1394 | June-Reg | Eric Turnbow | SS | | | 0 | | | - | | Jordan (Sandy,UT) | |
| 48 | 1421 | June-Reg | Ben Leuthard | P | 20 | 6-6 | 230 | R | R | College | | San Diego State University | |
| 49 | 1446** | June-Reg | Kevin House | OF | 18 | 5-11 | 195 | R | R | A- | | Alabama Southern Community College | |