| 1 | 11 | June-Reg | Dave Krynzel | OF | 18 | 6-1 | 180 | L | L | MLB | 2004-2005 | Green Valley (Henderson,NV) | $1,950,000 |
| 3 | 81 | June-Reg | Dane Artman | P | 18 | 6-3 | 215 | L | L | A | | Westminster Academy (Fort Lauderdale,FL) | $475,000 |
| 4 | 111 | June-Reg | Eric Henderson | P | 20 | 6-4 | 210 | L | L | A+ | | University of North Carolina | $275,000 |
| 5 | 141 | June-Reg | Jason Belcher | C | 18 | 6-1 | 190 | L | R | AA | | Walnut Ridge (Walnut Ridge,AR) | $250,000 |
| 6 | 171 | June-Reg | Brian Hicks | CF | 18 | 6-3 | 195 | L | R | Rookie | | Natchitoches Central (Natchitoches,LA) | $250,000 |
| 7 | 201 | June-Reg | Gerry Oakes | P | 18 | 6-5 | 192 | L | R | A+ | | Archbishop Carroll (Radnor,PA) | $175,000 |
| 8 | 231 | June-Reg | Bill Scott | 1B | 21 | 6-1 | 210 | R | R | AA | | UCLA | |
| 9 | 261 | June-Reg | Ryan Miller | P | 22 | 6-1 | 200 | R | R | AA | | University of Evansville | $50,000 |
| 10 | 291 | June-Reg | Brian Nielsen | P | 18 | 6-2 | 190 | L | L | A | | Seminole (Sanford,FL) | $65,000 |
| 11 | 321 | June-Reg | Corey Hart | LF | 18 | 6-6 | 200 | R | R | MLB | 2004-2009 | Greenwood (Bowling Green,KY) | |
| 12 | 351 | June-Reg | Heath McMurray | P | 21 | 6-3 | 195 | R | R | A | | Louisiana State University | |
| 13 | 381 | June-Reg | Matt Yeatman | P | 17 | 6-4 | 230 | R | R | AA | | Tomball (Tomball,TX) | |
| 14 | 411 | June-Reg | Todd West | SS | 21 | 5-11 | 165 | R | R | AA | | University of Texas | |
| 15 | 441 | June-Reg | Dan Hall | P | 21 | 6-3 | 225 | R | R | A | | Campbell University | |
| 16 | 471** | June-Reg | Scott Roehl | P | 18 | 6-0 | 200 | R | R | AAA | | Shoreland Lutheran (Somers,WI) | |
| 17 | 501 | June-Reg | Daryl Clark | IF | 20 | 6-2 | 205 | L | R | AA | | University of North Carolina | |
| 18 | 531 | June-Reg | Jonah Mcclanahan | OF | 19 | 6-2 | 190 | R | R | A | | Monterey (Monterey,CA) | |
| 19 | 561 | June-Reg | Zach Thompson | OF | 18 | 6-0 | 175 | L | L | A+ | | Callaway (Jackson,MS) | |
| 20 | 591** | June-Reg | Troy Pickford | P | 20 | 6-8 | 220 | R | R | A- | | Freed-Hardeman University | |
| 21 | 621 | June-Reg | Jeremy Shorey | P | 19 | 6-4 | 210 | R | R | Rookie | | Lisbon (Lisbon,ME) | |
| 22 | 651 | June-Reg | Scott Candelaria | IF | 21 | 6-2 | 190 | R | R | A+ | | University of New Mexico | |
| 23 | 681 | June-Reg | Brent Lewis | | 18 | 5-11 | 203 | L | R | College | | Germantown (Germantown,TN) | |
| 24 | 711 | June-Reg | Jude Voltz | IF | 22 | 6-6 | 215 | L | L | A+ | | University of Mississippi | |
| 25 | 741** | June-Reg | Luis Alvarado | P | 17 | 5-11 | 160 | L | L | Ind | | Luis Pales Matos (Santa Rosa,PR) | |
| 26 | 771** | June-Reg | Michael Reiss | P | 17 | 6-5 | 190 | R | R | Rookie | | Vaughan (Thornhill,ON) | |
| 27 | 801 | June-Reg | Travis Hake | SS-2B | 23 | 6-0 | 165 | R | R | A | | Carson-Newman College | |
| 28 | 831 | June-Reg | Todd Gelatka | P | 18 | 6-3 | 180 | L | R | Ind | | Golden West College | |
| 29 | 861** | June-Reg | Drew Friedberg | P | 21 | 6-2 | 200 | L | L | A | | Arizona State University | |
| 30 | 891** | June-Reg | Casey Myers | C-1B | 20 | 5-11 | 210 | R | R | AA | - | Arizona State University | |
| 31 | 921 | June-Reg | Mike Kabel | | | | | | | College | | Denham Springs (Denham Springs,LA) | |
| 32 | 951 | June-Reg | Kelly Werner | P | 23 | 6-3 | 215 | R | L | Rookie | | University of Minnesota | |
| 33 | 981** | June-Reg | Jon Coutlangus | OF | 19 | 6-1 | 180 | L | L | MLB | 2007-2007 | Indian River State College | |
| 34 | 1011** | June-Reg | Walter Sevilla | 2B | 18 | 5-8 | 170 | R | R | AA | | Palm Beach Community College | |
| 35 | 1041 | June-Reg | Michael Oiler | P | | | | | | - | | University of Wisconsin-Milwaukee | |
| 36 | 1071 | June-Reg | Barry Paulk | | 21 | 5-10 | 180 | L | R | A | | Florida International University | |
| 37 | 1101 | June-Reg | Shaun Gragg | C | 22 | 6-2 | 215 | L | R | Rookie | | Central Michigan University | |
| 38 | 1131 | June-Reg | Markum King | | | | | | | College | | Laney College | |
| 39 | 1161 | June-Reg | Ryan Trytten | P | 19 | 6-3 | 204 | R | R | AAA | | Ottumwa (Ottumwa,IA) | |
| 40 | 1191 | June-Reg | Alan Abram | CF | | | 0 | | | - | | Valley (West Des Moines,IA) | |
| 41 | 1220 | June-Reg | David Walczak | 1B | | | 0 | | | - | | Community College of Rhode Island | |
| 42 | 1249 | June-Reg | Byron Batson | P | 21 | 6-5 | 200 | R | R | Ind | | Campbell University | |
| 43 | 1278 | June-Reg | Kevin Shrout | | 22 | 6-2 | 210 | R | R | A | | University of Virginia | |
| 44 | 1305 | June-Reg | Mike Shwam | P | 22 | 6-2 | 200 | R | R | A+ | | Cal Poly | |
| 45 | 1331** | June-Reg | Steve Bray | P | 19 | 6-2 | 190 | R | R | AAA | | Norwalk Community College | |
| 46 | 1355 | June-Reg | Steve Tracey | P | | | 0 | | | - | | Columbus State Community College | |
| 47 | 1379 | June-Reg | Jason Henderson | P | | | 0 | | | - | | Community College of Rhode Island | |
| 48 | 1400 | June-Reg | Matt Mahoney | | | | | | | College | | University of North Dakota | |
| 49 | 1420 | June-Reg | Ryan Nohr | LF | 21 | 6-3 | 220 | R | R | Rookie | | Diablo Valley College | |
| 50 | 1440 | June-Reg | Aaron Rowe | P | | | 0 | | | - | | Novi (Novi,MI) | |