| 1 | 26 | June-Reg | Ben Christensen | P | 21 | 6-4 | 205 | R | R | AA | | Wichita State University | $1,062,500 |
| 2 | 77 | June-Reg | Mike Mallory | OF | 18 | 6-4 | 210 | R | R | AA | - | Dinwiddie County (Dinwiddie,VA) | |
| 3 | 110 | June-Reg | Ryan Gripp | 3B | 21 | 6-1 | 210 | R | R | AA | | Creighton University | |
| 4 | 140 | June-Reg | Steve Smyth | P | 21 | 6-1 | 220 | L | L | MLB | 2002-2002 | USC | |
| 5 | 170** | June-Reg | Todd Deininger | P | 17 | 6-3 | 200 | R | R | A | | Joliet Township (Joliet,IL) | |
| 6 | 200 | June-Reg | Ben Shaffar | P | 21 | 6-3 | 195 | B | R | AAA | | University of Kentucky | |
| 7 | 230 | June-Reg | Mike Dzurilla | IF | 21 | 6-0 | 190 | R | R | AAA | | St. John's University | |
| 8 | 260 | June-Reg | Dustin Pate | P | 18 | 6-5 | 185 | R | R | Rookie | | D W Daniel (Central,SC) | |
| 9 | 290 | June-Reg | Chris Curry | C | 21 | 6-1 | 195 | R | R | AAA | | Mississippi State University | |
| 10 | 320 | June-Reg | Jim Deschaine | IF | 21 | 6-0 | 200 | R | R | AAA | | Brandeis University | |
| 11 | 350 | June-Reg | Tim Lavery | P | 20 | 6-3 | 210 | L | L | A+ | | University of Illinois | |
| 12 | 380 | June-Reg | Condor Cash | LF | 19 | 6-2 | 200 | R | R | A- | | Stephens County (Toccoa,GA) | |
| 13 | 410 | June-Reg | Keto Anderson | 2B | 20 | 5-11 | 180 | L | R | A | | Chipola College | |
| 14 | 440 | June-Reg | Jandin Thornton-Murray | IF | 18 | 6-0 | 190 | B | R | A | | St. Louis (Honolulu,HI) | |
| 15 | 470 | June-Reg | Andrew Earley | P | 19 | 6-4 | 165 | R | R | A- | | Northwest Florida State College | |
| 16 | 500 | June-Reg | Tony Gsell | 2B | 22 | 6-0 | 195 | R | R | A | | Old Dominion University | |
| 17 | 530 | June-Reg | Derrick Cohens | RF | 24 | 6-0 | 205 | R | R | A- | | Lake City Community College | |
| 18 | 560 | June-Reg | Jamie Eppeneder | P | 20 | 6-3 | 215 | L | L | A+ | | Diablo Valley College | |
| 19 | 590 | June-Reg | John Webb | P | 20 | 6-3 | 205 | R | R | MLB | 2004-2005 | State College of Florida, Manatee-Sarasota | |
| 20 | 620 | June-Reg | Brandon Sing | OF | 18 | 6-5 | 225 | R | R | AAA | | Joliet Township (Joliet,IL) | |
| 21 | 650** | June-Reg | Rylie Ogle | P | 21 | 6-4 | 180 | L | L | A | | Long Beach City College | |
| 22 | 680 | June-Reg | Martin Calderon | SS | | | 0 | | | - | | El Modena (Orange,CA) | |
| 23 | 710 | June-Reg | Peter Zoccolillo | OF | 22 | 6-2 | 205 | R | R | MLB | 2003-2003 | Rutgers University | |
| 24 | 740 | June-Reg | Kevin Collins | | 18 | 6-2 | 210 | L | L | A+ | | Land O'Lakes (Land O'Lakes,FL) | |
| 25 | 770 | June-Reg | Ryan Van Horn | | 21 | 5-11 | 190 | R | R | A+ | | University of Oklahoma | |
| 26 | 800 | June-Reg | Ben Johnstone | OF | 21 | 6-0 | 195 | R | R | AA | | Yale University | |
| 27 | 830 | June-Reg | Casey Kopitzke | C | 21 | 6-2 | 210 | R | R | AAA | | University of Wisconsin | |
| 28 | 860 | June-Reg | David Lemon | OF | | | 0 | | | - | | Eustis (Eustis,FL) | |
| 29 | 890 | June-Reg | Ryan Jackson | | | | | | | College | | McNeil (Austin,TX) | |
| 30 | 920 | June-Reg | Ray Sadler | OF | 18 | 6-1 | 200 | R | R | MLB | 2005-2005 | Hill College | |
| 31 | 950 | June-Reg | Blake Melstrom | C | 17 | | 0 | | | - | | South Hills (Covina,CA) | |
| 32 | 980 | June-Reg | Jorge Acevedo | CF | | | 0 | | | - | | Efrain Sanchez Hidalgo (Moca,PR) | |
| 33 | 1010 | June-Reg | Greg Hanoian | CF | | | 0 | | | - | | USC | |
| 34 | 1040** | June-Reg | Stephen Solwick | P | | | 0 | | | - | | Rio Rancho (Rio Rancho,NM) | |
| 35 | 1070 | June-Reg | Eduardo Marquez | CF | 22 | 6-2 | 180 | R | R | A- | - | Nicholls State University | |
| 36 | 1100 | June-Reg | Jason Mackintosh | P | 18 | 6-0 | 200 | R | L | AAA | | Cerro Coso Community College | |
| 37 | 1130 | June-Reg | Jeff Ryan | SS | 22 | 5-9 | 185 | R | R | A | | Wichita State University | |
| 38 | 1160 | June-Reg | Cody Willis | P | | | 0 | | | - | | Deweyville (Deweyville,TX) | |
| 39 | 1190** | June-Reg | Federico Baez | P | 17 | 6-2 | 170 | R | R | AAA | | Jose S. Alegria (Dorado,PR) | |
| 40 | 1220 | June-Reg | Justin Valenti | CF | | | 0 | | | - | | Norwalk Community College | |
| 41 | 1249 | June-Reg | Beau Benton | CF | | | 0 | | | - | | Central Florida Community College | |
| 42 | 1277** | June-Reg | Donnie Bair | | 18 | 6-3 | 214 | R | L | College | | | |
| 43 | 1304 | June-Reg | Bryan Golden | C | 18 | 6-0 | 200 | R | R | Rookie | | Potomac State College of WVU | |
| 44 | 1331** | June-Reg | Jeremy Mannin | P | 18 | 6-6 | 175 | L | L | - | | Wenatchee (Wenatchee,WA) | |
| 45 | 1356 | June-Reg | Michael Sims | CF | | | 0 | | | - | | Karns (Knoxville,TN) | |
| 46 | 1380 | June-Reg | Chris Adams | | 21 | 6-2 | 180 | R | R | A- | | McLennan Community College | |
| 47 | 1404 | June-Reg | Dale Thayer | P | 18 | 6-0 | 190 | R | R | MLB | 2009-2009 | Edison (Huntington Beach,CA) | |
| 48 | 1428** | June-Reg | Charles Talanoa | P | 18 | 6-5 | 230 | R | R | Rookie | | El Segundo (El Segundo,CA) | |
| 49 | 1451** | June-Reg | Ryan Johnson | OF | 18 | 6-2 | 205 | L | L | A | | Laguna Hills (Laguna Hills,CA) | |
| 50 | 1472 | June-Reg | Thomas Syc | P | | | 0 | | | - | | Carl Sandburg (Orland Park,IL) | |