| 2 | 73 | June-Reg | Neal Musser | P | 18 | 6-2 | 209 | L | L | MLB | 2007-2008 | Benton Central (Oxford,IN) | |
| 2 | 84 | June-Reg | Jake Joseph | P | 21 | 6-1 | 210 | R | R | AAA | | Cosumnes River College | |
| 3 | 106 | June-Reg | Jeremy Griffiths | P | 21 | 6-6 | 240 | R | R | MLB | 2003-2004 | University of Toledo | |
| 4 | 136 | June-Reg | Angel Pagan | OF | 17 | 6-1 | 181 | R | R | MLB | 2006-2009 | Republica De Colombia (Rio Piedras,PR) | |
| 5 | 166 | June-Reg | Nicholas James | P | | | 0 | | | Rookie | | Allan Hancock College | |
| 6 | 196** | June-Reg | Tyler Parker | C-1B | 18 | 6-3 | 212 | R | R | AA | | Lassiter (Marietta,GA) | |
| 7 | 226 | June-Reg | Rodney Nye | 3B | 22 | 6-4 | 215 | R | R | AAA | | University of Arkansas | $20,000 |
| 8 | 256 | June-Reg | Forrest Lawson | OF | 18 | 6-3 | 193 | R | R | A+ | | Rogers (Puyallup,WA) | |
| 9 | 286 | June-Reg | Wayne Lydon | OF | 18 | 6-2 | 193 | R | R | AAA | | Valley View high school Archbald,PA (Archbald,PA) | |
| 10 | 316 | June-Reg | Prentice Redman | OF | 19 | 6-3 | 185 | R | R | MLB | 2003-2003 | Bevill State Community College-Fayette | |
| 11 | 346 | June-Reg | Joey Cole | P | 21 | 6-8 | 255 | R | R | AAA | | University of Texas-Pan American | |
| 12 | 376 | June-Reg | Paul Viole | P | 21 | 5-10 | 170 | R | R | A+ | | Seton Hall University | |
| 13 | 406 | June-Reg | Robert McIntyre | SS | 18 | 5-10 | 180 | R | R | A+ | | Hillsborough (Tampa,FL) | |
| 14 | 436 | June-Reg | John Hendricks | P | 21 | 6-1 | 240 | L | L | A | | Wake Forest University | |
| 15 | 466 | June-Reg | Steven Elzy | C | 21 | 6-0 | 188 | R | R | A | | University of New Mexico | |
| 16 | 496** | June-Reg | Gene Desalme | P | 19 | 6-5 | 210 | L | L | Ind | | St. Louis Community College-Meramec | |
| 17 | 526 | June-Reg | Kevin Ciarrachi | C | 21 | 6-1 | 190 | R | R | A | | University of Northern Iowa | |
| 18 | 556 | June-Reg | Matt Smith | P | 20 | 6-5 | 240 | R | R | AAA | | Missouri State University | |
| 19 | 586 | June-Reg | Jose Pabon | 2B | | | | | | College | | Potomac (Dumfries,VA) | |
| 20 | 616** | June-Reg | Rob Henkel | P | 20 | 6-2 | 210 | L | R | AAA | | UCLA | |
| 21 | 646** | June-Reg | Adam Manley | 1B | 20 | 6-2 | 194 | L | L | A+ | | College of Southern Idaho | |
| 22 | 676 | June-Reg | Kyle Woods | LF | 21 | 6-0 | 200 | R | R | - | | University of Washington | |
| 23 | 706 | June-Reg | Wilbur Jackson | SS | 18 | 6-2 | 170 | R | R | Rookie | | Westside (Augusta,GA) | |
| 24 | 736** | June-Reg | Dustin Brisson | DH | 21 | 6-3 | 210 | L | R | AA | | University of Central Florida | |
| 25 | 766 | June-Reg | Matt Dyer | C | | | 0 | R | R | A- | | Manchester North (Manchester,IN) | |
| 26 | 796** | June-Reg | Wesley Wright | P | | | | | | - | | University of California-Santa Barbara | $0 |
| 27 | 826 | June-Reg | Samuel Lopez | SS | | | 0 | R | R | A- | | Freed-Hardeman University | |
| 28 | 856 | June-Reg | Steve Bennett | P | 22 | 6-4 | 250 | R | R | AA | | Gonzaga University | |
| 29 | 886 | June-Reg | Bryan Loeb | C | 21 | 6-2 | 203 | R | R | AAA | | Baylor University | |
| 30 | 916 | June-Reg | Matthew Mize | 2B | | | 0 | | | A- | | University of Texas | |
| 31 | 946 | June-Reg | Orlando Roman | P | 20 | 6-2 | 211 | R | R | AAA | | Indian Hills Community College-Centerville | |
| 32 | 976 | June-Reg | Brian Williamson | P | | | 0 | | | A- | | Cornell University | |
| 33 | 1006 | June-Reg | Lionel Rogers | P | 21 | 5-11 | 170 | R | R | A- | | Freed-Hardeman University | |
| 34 | 1036 | June-Reg | Patrick O'Sullivan | OF | 22 | 6-3 | 225 | R | R | AAA | | Austin Peay State University | |
| 35 | 1066 | June-Reg | Jamie Gonzales | P | 19 | 6-1 | 180 | R | R | Ind | | Porterville College | |
| 36 | 1096** | June-Reg | Myles Ledbetter | P | 18 | 6-5 | 210 | R | R | - | | | |
| 37 | 1126 | June-Reg | Graeme Brown | P | | | 0 | | | Rookie | | Brown University | |
| 38 | 1156 | June-Reg | Mike Jacobs | C | 18 | 6-2 | 200 | L | R | MLB | 2005-2009 | Grossmont College | |
| 39 | 1186 | June-Reg | Carrington Fisk | P | | 6-2 | 205 | R | R | - | | Keene (Keene,NH) | |
| 40 | 1216 | June-Reg | Cory Harris | OF | 19 | 5-10 | 181 | R | R | A+ | | Pensacola Junior College | |
| 41 | 1245** | June-Reg | Philip Perry | | 18 | 6-3 | 206 | R | R | College | | Walton (Marietta,GA) | |
| 42 | 1273 | June-Reg | Darius Shelby | CF | 18 | | 0 | | | - | | Valley View (Moreno Valley,CA) | |
| 43 | 1300 | June-Reg | Ryan Hay | | | | | | | College | | St. Paul (Niagara Falls,ON) | |
| 44 | 1327 | June-Reg | Brian Kelly | | | | | | | College | | Southaven (Southaven,MS) | |
| 45 | 1352 | June-Reg | Ross Peeples | P | 19 | 6-4 | 198 | L | L | A+ | | Middle Georgia College | |
| 46 | 1376 | June-Reg | Aaron Gureckis | CF | | | 0 | | | - | | Nashua (Nashua,NH) | |
| 47 | 1400 | June-Reg | Andre Decordova | | | | | | | College | | Monsignor Pace (Miami,FL) | |
| 48 | 1424 | June-Reg | Vincent White | LF | | | 0 | | | - | | John Abbott College (Ste Anne de Bellevue,QC) | |
| 49 | 1447 | June-Reg | Eric Bernier | CF | 17 | 6-0 | 205 | R | R | - | | Edouard Montpetit (Montreal,QC) | |
| 50 | 1468 | June-Reg | John Hoyos | P | 18 | | 0 | | | - | | San Gabriel (San Gabriel,CA) | |