| 1 | 3 | June-Reg | Corey Patterson | OF | 18 | 5-9 | 180 | L | R | MLB | 2000-2009 | Harrison (Kennesaw,GA) | $3,700,000 |
| 2 | 46 | June-Reg | Dave Kelton | 3B | 18 | 6-3 | 205 | R | R | MLB | 2003-2004 | Troup County (LaGrange,GA) | $400,000 |
| 2 | 62 | June-Reg | Jeff Goldbach | C | 18 | 6-0 | 190 | R | R | AA | - | Princeton (Princeton,IN) | |
| 3 | 76 | June-Reg | Robert Bass | 3B | | | 0 | | | - | | Fayette County (Fayette,AL) | |
| 4 | 106 | June-Reg | Jeramy Gomer | P | 19 | 6-2 | 195 | L | L | A+ | | Durant (Plant City,FL) | |
| 5 | 136 | June-Reg | Aaron Sams | P | 22 | 6-1 | 200 | L | L | A+ | | James Madison University | |
| 6 | 166 | June-Reg | Tony Schrager | 2B | 21 | 6-1 | 185 | R | R | AAA | | Stanford University | |
| 7 | 196 | June-Reg | Keola Delatori | P | 19 | 6-0 | 180 | R | R | A | | Triton College | |
| 8 | 226 | June-Reg | Will Ohman | P | 20 | 6-2 | 195 | L | L | MLB | 2000-2009 | Pepperdine University | |
| 9 | 256** | June-Reg | Steve Reba | P | 18 | 6-3 | 190 | R | R | A- | | Concordia Lutheran (Fort Wayne,IN) | |
| 10 | 286 | June-Reg | Nate Frese | SS | 20 | 6-3 | 200 | R | R | AAA | | University of Iowa | |
| 11 | 316 | June-Reg | Dustin Krug | P | 21 | 6-5 | 225 | R | R | AA | | Lassen Community College | |
| 12 | 346 | June-Reg | Anthony Zamarripa | P | 21 | 6-4 | 240 | R | R | A | | Texas A&M University | |
| 13 | 376 | June-Reg | David Ericks | P | 18 | 6-4 | 180 | R | R | A- | | Illian Christian (St. John,IN) | |
| 14 | 406 | June-Reg | Tom Lipari | P | 19 | 6-5 | 185 | L | L | A+ | | Indian Hills (Neb.) | |
| 15 | 436 | June-Reg | Casey Grzecka | C | 18 | 6-2 | 200 | R | R | AA | | Santa Margarita Catholic (Rancho Santa Margarita,CA) | |
| 16 | 466 | June-Reg | Omar Rohena | 3B | 17 | 6-3 | 185 | R | R | Rookie | | Casiano Cepeda (Rio Grande,PR) | |
| 17 | 496 | June-Reg | Eric Hinske | 3B | 20 | 6-2 | 225 | L | R | MLB | 2002-2009 | University of Arkansas | |
| 18 | 526** | June-Reg | Carlton Wells | P | 18 | 6-2 | 210 | L | L | A+ | | King (Tampa,FL) | |
| 19 | 556 | June-Reg | Joe Ohm | | 21 | 6-3 | 205 | R | R | A- | | University of Wisconsin | |
| 20 | 586** | June-Reg | Dennis Cervenka | P | 18 | 6-5 | 210 | L | L | Rookie | | La Vernia (La Vernia,TX) | |
| 21 | 616 | June-Reg | Larry Dant | P | 21 | 6-4 | 235 | R | R | A+ | | Dana College | |
| 22 | 646 | June-Reg | Mikel Moreno | 2B | 22 | 5-10 | 180 | R | R | A | | Arizona State University | |
| 23 | 676 | June-Reg | Mike Carey | P | | | 0 | | | - | | Westminster College | |
| 24 | 706 | June-Reg | Charles Redmond | | | | | | | College | | Liberty University | |
| 25 | 736** | June-Reg | Nick Moran | P | 18 | 6-5 | 195 | R | R | A+ | | Elk Grove (Elk Grove,CA) | |
| 26 | 766** | June-Reg | Eric Arnold | 2B-3B | 17 | 6-1 | 190 | R | R | AA | | LaPorte (LaPorte,TX) | |
| 27 | 796 | June-Reg | Tydus Meadows | OF | 20 | 6-2 | 215 | R | R | AAA | | Vanderbilt University | |
| 28 | 826** | June-Reg | Adam Cox | P | 18 | 6-4 | 165 | L | L | A+ | | Thomas County Central (Thomasville,GA) | |
| 29 | 856 | June-Reg | Lawrence Alvarez | P | 18 | 6-3 | 210 | R | R | A+ | | Nogales (La Puente,CA) | |
| 30 | 886 | June-Reg | Justin Smith | C-3B | 18 | 6-5 | 210 | B | R | Rookie | | Lake Brantley (Altamonte Springs,FL) | |
| 31 | 916 | June-Reg | Leonardo Torres | P | | | 0 | | | A+ | | Metropolitan (Somerton,AZ) | |
| 32 | 946 | June-Reg | Matt Griffin | SS | 22 | 6-1 | 192 | R | R | A | | Southern Polytechnic State University | |
| 33 | 976 | June-Reg | Chris Brown | P | 23 | 6-0 | 170 | R | R | A- | | Northwestern University | |
| 34 | 1006 | June-Reg | Dustin Brentz | P | | | 0 | | | - | | Moss Point (Moss Point,MS) | |
| 35 | 1036 | June-Reg | Matt Whitehead | P | | | 0 | | | - | | Northeast Texas Community College | |
| 36 | 1066 | June-Reg | Ben Johanning | 1B | 18 | 6-3 | 220 | L | L | A- | | Osceola (Kissimmee,FL) | |
| 37 | 1096** | June-Reg | Trey Lunsford | C | 19 | 6-1 | 195 | R | R | MLB | 2002-2003 | Grayson Coun. San Angelo (TX) | |
| 38 | 1126 | June-Reg | Chris Wood | SS | | | 0 | | | - | | University of Central Florida | |
| 39 | 1156** | June-Reg | Keith Whatley | P | 18 | 6-2 | 210 | L | L | A+ | | Atlanta (Atlanta,TX) | |
| 40 | 1186 | June-Reg | Jonathan Macklin | P | | | 0 | | | - | | Hallandale (Hallandale,FL) | |
| 41 | 1216 | June-Reg | Nate Beucler | | 18 | 6-0 | 185 | R | R | Ind | | Huntington (CA) | |
| 42 | 1246 | June-Reg | Kevin Boles | C | 23 | 5-11 | 185 | L | R | A- | | University of South Florida | |
| 43 | 1275** | June-Reg | Jacob Pierce | | | | | | | College | | Longview (Longview,TX) | |
| 44 | 1301 | June-Reg | Justin Olson | | 18 | 6-3 | 215 | R | R | AA | | Oak Park-River Forest (Oak Park,IL) | |
| 45 | 1326 | June-Reg | Christopher Connally | OF | 22 | 5-11 | 190 | R | R | A+ | | Texas Christian University | |
| 46 | 1351 | June-Reg | Dustin Matthews | SS | 18 | 6-3 | 180 | R | R | Ind | | Whitney Young (Chicago,IL) | |
| 47 | 1373 | June-Reg | Jon-Mark Sprowl | C | 17 | 6-1 | 200 | L | R | AAA | | | |
| 48 | 1394 | June-Reg | Chris Kellet | | | | | | | College | | Deltona (Deltona,FL) | |
| 49 | 1414 | June-Reg | Greg Eubanks | | | | | | | College | | Wellington Christian (Wellington,FL) | |
| 50 | 1431** | June-Reg | Dan Jackson | P | 19 | 6-2 | 210 | R | R | AA | | South Suburb (Lyons,IL) | |