| 1 | 22 | June-Reg | Matt Thornton | P | 21 | 6-6 | 220 | L | L | MLB | 2004-2009 | Grand Valley State University | $925,000 |
| 2 | 65** | June-Reg | Jeff Verplancke | P | 20 | 6-3 | 200 | R | R | AAA | | Cal State Los Angeles | |
| 3 | 95 | June-Reg | Andy Van Hekken | P | 18 | 6-3 | 175 | R | L | MLB | 2002-2002 | Holland (Holland,MI) | |
| 4 | 125 | June-Reg | Jerry Amador | OF | 18 | 6-0 | 180 | R | R | A+ | | Luis Felipe Crespo (Camuy,PR) | |
| 5 | 155 | June-Reg | Corey Freeman | IF | 18 | 5-11 | 165 | R | R | AAA | | King (Tampa,FL) | |
| 6 | 185 | June-Reg | Jake Weber | OF | 22 | 5-11 | 188 | L | R | AAA | | University of North Carolina | |
| 7 | 215 | June-Reg | Shawn Mccorkle | 1B | 20 | 6-5 | 230 | L | R | A+ | | Montclair State University | |
| 8 | 245 | June-Reg | Craig Kuzmic | IF | 21 | 6-1 | 195 | B | R | AAA | | Texas A&M University | |
| 9 | 275 | June-Reg | Neil Longo | P | 20 | 6-5 | 200 | R | R | A+ | | Manhattan College | |
| 10 | 305** | June-Reg | Jason Pomar | P | | | | R | R | A- | | University of South Carolina | |
| 11 | 335** | June-Reg | Jamey Shearin | | | | | | | College | | University of North Carolina | |
| 12 | 365 | June-Reg | Justin Dunning | P | 21 | 6-3 | 210 | R | R | AA | | Stanford University | |
| 13 | 395 | June-Reg | Israel Cruz | SS | 18 | 6-0 | 170 | R | R | A+ | | Puerto Rico. (Puerto Rico.) | |
| 14 | 425 | June-Reg | Schuyler Doakes | SS | 21 | 5-7 | 160 | B | R | Ind | | Jackson State University | |
| 15 | 455 | June-Reg | Wilfredo Quintana | OF | 20 | 5-11 | 181 | R | R | A+ | | Indian Hills (Centerville,Iowa.) | |
| 16 | 485 | June-Reg | Patrick Barnes | P | 18 | 6-2 | 180 | R | L | A | | Englewood (Jacksonville,FL) | |
| 17 | 515 | June-Reg | Steve Wright | | 22 | 5-11 | 185 | L | L | A- | | Liberty University | |
| 18 | 545 | June-Reg | Craig Willis | P | 21 | 6-3 | 195 | R | R | A | | Pacific Lutheran University | |
| 19 | 575 | June-Reg | Rick Southall | 1B | 21 | 6-3 | 225 | L | R | A+ | | Portland State University | |
| 20 | 605** | June-Reg | Jon Nelson | 1B | 18 | 6-5 | 210 | R | R | AAA | | Timpanogos (Orem,UT) | |
| 21 | 635 | June-Reg | Brandon DeJaynes | | 17 | 6-2 | 190 | R | R | A | | Quincy (Quincy,IL) | |
| 22 | 665 | June-Reg | Mike Myers | SS | 18 | 6-1 | 190 | R | R | MLB | 2007-2007 | | |
| 23 | 695 | June-Reg | Bryan Hartung | | | | | | | College | | Sinton (Sinton,TX) | |
| 24 | 725 | June-Reg | Matt Woodward | 1B | 22 | 6-2 | 192 | R | R | A | | Florida State University | |
| 25 | 755** | June-Reg | Craig Helmandollar | P | | | 0 | | | - | | North Stafford (Stafford,VA) | |
| 26 | 785 | June-Reg | Caleb Balbuena | P | 21 | 6-7 | 240 | R | R | A+ | | Long Beach State University | |
| 27 | 815 | June-Reg | Jason Crist | P | | | 0 | | | - | | Missouri State University | |
| 28 | 845 | June-Reg | Bo Robinson | | 22 | 6-2 | 195 | R | R | AAA | | University of North Carolina | |
| 29 | 875 | June-Reg | Derald Deason | OF | | | 0 | | | - | | Orange (Orange,CA) | |
| 30 | 905** | June-Reg | John Rheinecker | P | 19 | 6-2 | 215 | L | L | MLB | 2006-2007 | Belleville (Belleville,IL) | |
| 31 | 935 | June-Reg | Roy Wells | P | 19 | 6-3 | 195 | B | R | A | | Volunteer State Community College | |
| 32 | 965 | June-Reg | Clayton Bried | | | | | | | College | | Apache Junction (Apache Junction,AZ) | |
| 33 | 995** | June-Reg | Branden Pack | 1B | 19 | 6-3 | 215 | B | R | A+ | | Cypress College | |
| 34 | 1024 | June-Reg | Nick Padilla | P | 19 | 6-3 | 200 | R | R | A | | Cerritos College | |
| 35 | 1055** | June-Reg | Joseph Rodriguez | 2B | 20 | 5-9 | 183 | R | R | A | | Menardo Cara (Trujillo Alto,PR.) | |
| 36 | 1085 | June-Reg | Tim Dierkes | C | | | 0 | | | - | | Mehlville (St. Louis,MO) | |
| 37 | 1115 | June-Reg | Michael Kashuba | P | | | 0 | | | - | | Clarence Fulton (Vernon,CT) | |
| 38 | 1145 | June-Reg | Clint Patton | C | 17 | | 0 | | | - | | Sonora (La Habra,CA) | |
| 39 | 1175 | June-Reg | Aaron Kirkland | P | 19 | 6-5 | 200 | R | R | A+ | | Lurleen B. Wallace Community College | |
| 40 | 1205** | June-Reg | Adam Thomas | P | 18 | 6-0 | 170 | l | L | Rookie | | North Miami (North Miami,FL) | |
| 41 | 1235 | June-Reg | Nicholas Hobbs | OF | | | 0 | | | - | | Chaparral (Las Vegas,NV) | |
| 42 | 1264** | June-Reg | Geoff Comfort | OF | 18 | 6-0 | 210 | R | R | A+ | | Junipero Serra (San Mateo,CA) | |
| 43 | 1292 | June-Reg | James Farris | C | | | 0 | | | - | | Hattiesburg (Hattiesburg,MS) | |
| 44 | 1318** | June-Reg | Israel Torres | P | 18 | 6-0 | 225 | L | L | - | | Cerritos College | |
| 45 | 1342 | June-Reg | Drew Parkin | P | | | 0 | | | - | | Aliso Niguel (Aliso Viejo,CA) | |
| 46 | 1365** | June-Reg | Ernie Durazo | 1B | 19 | 5-9 | 201 | L | R | A | | Pima Community College | |
| 47 | 1386** | June-Reg | Clayton McCullough | C | 18 | 5-10 | 180 | L | R | AAA | | J.H. Rose (Greenville,NC) | |
| 48 | 1406 | June-Reg | Greg Pines | C | 19 | 6-0 | 180 | R | R | A+ | | Saddleback (Santa Ana,CA) | |
| 49 | 1423 | June-Reg | Scott Atchison | P | 22 | 6-2 | 180 | R | R | MLB | 2004-2007 | Texas Christian University | |
| 50 | 1439 | June-Reg | David Holliday | P | | | 0 | | | - | | Anderson-Shiro (Anderson,TX) | |