| 1 | 15 | June-Reg | Jason Dellaero | SS | 20 | 6-2 | 195 | B | R | MLB | 1999-1999 | University of South Florida | $1,056,000 |
| 1 | 33 | June-Reg | Kyle Kane | P | 21 | 6-3 | 215 | L | R | AAA | | Saddleback College | $537,500 |
| 1 | 34 | June-Reg | Brett Caradonna | OF | 18 | 6-1 | 185 | L | R | AAA | | El Capitan (Lakeside,CA) | $497,500 |
| 1 | 43 | June-Reg | Aaron Myette | P | 19 | 6-4 | 195 | R | R | MLB | 1999-2004 | Central Arizona College | $375,000 |
| 1 | 46 | June-Reg | Jim Parque | IhP | 21 | 5-11 | 165 | L | L | MLB | 1998-2003 | UCLA | $345,500 |
| 1 | 51 | June-Reg | Rocky Biddle | P | 21 | 6-3 | 230 | R | R | MLB | 2000-2004 | | |
| 2 | 62** | June-Reg | Jeff Weaver | P | 20 | 6-5 | 200 | R | R | MLB | 1999-2009 | Fresno State University | |
| 3 | 99 | June-Reg | J.R. Mounts | OF | 18 | 6-0 | 190 | R | R | A+ | | Key West (Key West,FL) | |
| 4 | 129 | June-Reg | Curtis Whitley | thP | 23 | 6-4 | 240 | L | L | AA | | | |
| 5 | 159 | June-Reg | Pat Daneker | P | 21 | 6-3 | 195 | R | R | MLB | 1999-1999 | | |
| 6 | 189 | June-Reg | Brian Scott | ThP | 21 | 6-3 | 190 | R | R | AA | | | |
| 7 | 219 | June-Reg | Jake Meyer | ThP | 22 | 6-1 | 190 | R | R | AAA | | UCLA | |
| 8 | 249 | June-Reg | Tim Currens | ThP | 21 | 6-4 | 195 | L | R | A+ | | | |
| 9 | 279 | June-Reg | Rolando Garza | SS | 17 | 6-4 | 210 | R | R | A+ | | Coachella Valley (Coachella,CA) | |
| 10 | 309 | June-Reg | Jamie Smith | rhP-C | 21 | 6-2 | 193 | R | R | Rookie | | | |
| 11 | 339 | June-Reg | Kevin Connacher | 2B | 22 | 5-9 | 175 | R | R | AAA | - | Florida Atlantic University | |
| 12 | 369 | June-Reg | Andrew Jacobson | P | 21 | 6-8 | 210 | R | R | A | | | |
| 13 | 399 | June-Reg | Ryan Hankins | 2B | 21 | 5-11 | 200 | R | R | AAA | - | UNLV | |
| 14 | 429 | June-Reg | Chad Durham | 2B-OF | 19 | 5-8 | 175 | R | R | AA | | | |
| 15 | 459 | June-Reg | Travis Rapp | C | 22 | 6-2 | 205 | R | R | AA | | | |
| 16 | 489 | June-Reg | Adrean Acevedo | OF | 19 | 6-1 | 195 | L | L | Ind | | | |
| 17 | 519 | June-Reg | Shawn Barksdale | p | | | 0 | | | - | | Etowah (Attalla,AL) | |
| 18 | 549 | June-Reg | Tom Williams | P | 21 | 6-1 | 220 | R | R | Rookie | | | |
| 19 | 579 | June-Reg | Jay Bernard | p | 18 | 6-5 | 220 | R | R | A | | Rutherford (Panama City,FL) | |
| 20 | 609 | June-Reg | Tyson Boston | 3B | 18 | 6-3 | 210 | R | R | Ind | | | |
| 21 | 639 | June-Reg | Jay Kvasnicka | P | 20 | 6-4 | 180 | R | R | Ind | | | |
| 22 | 669 | June-Reg | Stuart Rohling | P | 19 | 6-4 | 185 | R | R | A | | | |
| 23 | 699 | June-Reg | Matt Berger | 1B | 22 | 6-1 | 195 | R | R | A+ | | | |
| 24 | 729 | June-Reg | Cormac Joyce | p | | | | | | - | | Burke (Washingtonville,NY) | |
| 25 | 759** | June-Reg | Eric Thompson | 1B | 19 | 6-2 | 190 | R | R | AAA | | Gardner Edgerton (Gardner,KS) | |
| 26 | 789 | June-Reg | Joshua Johnston | P | | | | | | - | | | |
| 27 | 819** | June-Reg | Tony Garcia | C | 17 | 5-10 | 165 | R | R | A+ | | Miami-Dade College | |
| 28 | 849 | June-Reg | Richardo Ramon | OF | | | | | | Rookie | | Miami Senior (Miami,FL) | |
| 29 | 879 | June-Reg | Matthew Goldsmith | p | | | | | | - | | Rockwall-Heath (Rockwall,TX) | |
| 30 | 909 | June-Reg | Ray Goirgolzarri | 3B | | | | | | - | | Miami-Dade South Community College | |
| 31 | 939 | June-Reg | Michael Malonee | Ihp | | | | | | - | | | |
| 32 | 969 | June-Reg | Chadd Clarey | P | | | | | | - | | Des Moines Area Community College | |
| 33 | 999 | June-Reg | Mark Floersch | p | | | | | | - | | New Trier (Winnetka,IL) | |
| 34 | 1029** | June-Reg | Jason Moates | p | 18 | 6-2 | 210 | R | R | A+ | | Central (Columbia,TN) | |
| 35 | 1059 | June-Reg | Nelson Carreno | C-Of | | | | | | - | | Miami Christian (Miami,FL) | |
| 36 | 1089 | June-Reg | Edward Scott | SS-Of | 17 | 5-11 | 175 | R | R | A | | Dominguez (Compton,CA) | |
| 37 | 1119 | June-Reg | Kevin Provencher | p | | | | | | - | | Forest Hill (West Palm Beach,FL) | |
| 38 | 1149 | June-Reg | John Newman | p-SS | | | | | | - | | Skyline (Idaho Falls,ID) | |
| 39 | 1179 | June-Reg | Luis Suarez | SS | 18 | 6-1 | 175 | R | R | AA | | Miami-Dade College | |
| 40 | 1209 | June-Reg | Darryll Roque | p | 20 | 6-4 | 210 | B | R | A+ | | | |
| 41 | 1237 | June-Reg | Michael Hil | 3B-of | | | | | | - | | | |
| 42 | 1264 | June-Reg | Richard Clover | P | | | | | | College | | University of Central Missouri | |
| 43 | 1288 | June-Reg | Jeff Radziewicz | 1B | | | | | | - | | Easton (Easton,MD) | |
| 44 | 1310 | June-Reg | Matt Smith | P | 18 | 6-5 | 225 | L | L | MLB | 2006-2007 | | |
| 45 | 1331** | June-Reg | Jason Aspito | SS | 18 | 6-0 | 200 | L | R | AAA | | Driscoll Catholic (Addison,IL) | |
| 46 | 1351 | June-Reg | Francisco Armas | C | | | | | | - | | | |
| 47 | 1370 | June-Reg | David Siemon | 3B | 17 | 6-4 | 200 | R | R | A | | Forest Hill (West Palm Beach,FL) | |
| 48 | 1388 | June-Reg | Jackie Pettigrew | p | | | | | | - | | Sperry (Skiatook,OK) | |
| 49 | 1405 | June-Reg | J.J. Newkirk | of | 21 | 5-10 | 185 | L | L | A | | | |
| 50 | 1421 | June-Reg | James Lansford | C | | | | | | - | | San Angelo Central (San Angelo,TX) | |
| 51 | 1436 | June-Reg | Luke Albert | C | 18 | 6-2 | 200 | B | R | A | | Chaminade-Madonna (Hollywood,FL) | |
| 52 | 1450 | June-Reg | Elio Borges | SS | 19 | 6-0 | 180 | B | R | A | | Miami Senior (Miami,FL) | |