| 1 | 4 | June-Reg | Jason Grilli | P | 20 | 6-4 | 185 | R | R | MLB | 2000-2009 | Seton Hall University | $1,875,000 |
| 1 | 49 | June-Reg | Dan Mckinley | OF | 21 | 6-0 | 180 | L | R | AAA | | Arizona State University | $390,000 |
| 2 | 56 | June-Reg | Scott Linebrink | P | 20 | 6-3 | 185 | R | R | MLB | 2000-2009 | Texas State University | |
| 3 | 88 | June-Reg | Jeff Andra | P | 21 | 6-5 | 210 | L | L | AAA | | University of Oklahoma | |
| 4 | 118 | June-Reg | Kevin McGerry | P | 17 | 6-3 | 215 | R | R | A+ | | Father Judge (Philadelphia,PA) | |
| 5 | 148 | June-Reg | Giuseppe Chiaramonte | C | 21 | 6-0 | 200 | R | R | AAA | | Fresno State University | |
| 6 | 178 | June-Reg | Kevin Joseph | P | 20 | 6-4 | 200 | R | R | MLB | 2002-2002 | Rice University | |
| 7 | 208 | June-Reg | Joe Farley | P | 22 | 6-2 | 185 | L | L | AA | | | |
| 8 | 238 | June-Reg | Brett Casper | OF | 21 | 6-3 | 215 | R | R | AA | | Oral Roberts University | |
| 9 | 268** | June-Reg | Todd Bellhorn | P | 20 | 6-0 | 210 | R | L | A | | University of Central Florida | |
| 10 | 298 | June-Reg | Joe Holland | P | | | | | | - | | Bowling Green State University | |
| 11 | 328 | June-Reg | Travis Young | 2B | 22 | 6-1 | 185 | R | R | AAA | | University of New Mexico | |
| 12 | 358 | June-Reg | Jason Verdugo | p | 22 | 6-2 | 190 | R | R | AAA | | Arizona State University | |
| 13 | 388 | June-Reg | C.J. Ankrum | 1B | 21 | 6-1 | 185 | L | L | A- | | Cal State Fullerton | |
| 14 | 418 | June-Reg | William Otero | SS | 22 | 5-11 | 175 | R | R | AA | | Ohio Dominican University | |
| 15 | 448 | June-Reg | Michael Byas | OF | 21 | 6-0 | 170 | B | R | AAA | | Missouri State University | |
| 16 | 478 | June-Reg | Tom Nielsen | p | 20 | 6-2 | 170 | R | L | A+ | | Fordham University | |
| 17 | 508** | June-Reg | Scott Goodman | OF | 19 | 6-1 | 210 | L | L | A+ | | Cuesta College | |
| 18 | 538 | June-Reg | Darin Cissell | OF | | | | | | - | | Saint Louis University | |
| 19 | 568 | June-Reg | Nathan Rice | p | 23 | 6-5 | 200 | L | L | A+ | | Cal State Northridge | |
| 20 | 598 | June-Reg | Jesse Travis | p | 22 | 6-1 | 195 | R | R | A+ | | University of Portland | |
| 21 | 628 | June-Reg | Paul Stryhas | 3B | 20 | 5-10 | 180 | R | R | Rookie | | State College of Florida, Manatee-Sarasota | |
| 22 | 658 | June-Reg | Mark Hills | p | 18 | 6-1 | 200 | L | L | A | | Chemeketa Community College | |
| 23 | 688 | June-Reg | Bryan Guse | C | | | | | | A+ | | University of Minnesota | |
| 24 | 718 | June-Reg | Will Malerich | p | 21 | 6-0 | 180 | L | L | AA | | College of William and Mary | |
| 25 | 748** | June-Reg | Justin Lincoln | SS | 18 | 6-3 | 206 | R | R | A+ | | Sarasota (Sarasota,FL) | |
| 26 | 778** | June-Reg | Todd Uzzell | p | 19 | 6-3 | 205 | R | R | AA | | El Paso Community College | |
| 27 | 808 | June-Reg | Shawn Austin | p | 23 | 6-0 | 205 | R | L | A- | | Florida Southern College | |
| 28 | 838 | June-Reg | George Crawford | OF | | | | | | - | | Madison (Portland,OR) | |
| 29 | 868 | June-Reg | Zachary Wells | OF | 20 | 6-4 | 205 | R | R | A+ | | Diablo Valley College | |
| 30 | 898 | June-Reg | Tim Flaherty | C | 20 | 6-4 | 220 | R | R | AA | - | East Carolina University | |
| 31 | 928 | June-Reg | Clay Greene | 2B-OF | 22 | 6-0 | 185 | R | R | A+ | | University of Tennessee | |
| 32 | 958 | June-Reg | Luis Santiago | p | | | | | | - | | Adolfo Rivera (Penuelas,PR) | |
| 33 | 988 | June-Reg | Mike Stevenson | p | 20 | 6-3 | 195 | R | R | - | | Orange County Community College | |
| 34 | 1018 | June-Reg | Ty Burch | Of | | | | | | - | | Cosumnes River College | |
| 35 | 1048 | June-Reg | Shawn Lindsey | Of | 20 | 6-2 | 188 | L | L | A+ | | Lower Columbia Community College | |
| 36 | 1078** | June-Reg | Dennis Anderson | C | 19 | 6-0 | 200 | B | R | AA | | Pima Community College | |
| 37 | 1108 | June-Reg | Jonathan Storke | SS | | | | | | Ind | | Cuesta College | |
| 38 | 1138 | June-Reg | Lance Woodcock | SS | 20 | 6-2 | 160 | R | R | A- | | American River College | |
| 39 | 1168 | June-Reg | Justin Thurman | p | | | | | | - | | Blue Mountain Community College | |
| 40 | 1198** | June-Reg | Andy Neufeld | SS | 18 | 5-11 | 175 | L | R | AAA | - | Oviedo (Oviedo,FL) | |
| 41 | 1228 | June-Reg | Clifton Bowie | of | | | | | | - | | Alba (Bayou La Batre,AL) | |
| 42 | 1255 | June-Reg | John Tatum | C | | | | | | - | | Forest Hill (West Palm Beach,FL) | |
| 43 | 1279 | June-Reg | Mark Mosier | 3B | | | | | | A+ | | University of Chicago | |
| 44 | 1302 | June-Reg | Jeremy Luster | 3B-1b | 20 | 6-4 | 210 | B | R | AA | | Georgia Perimeter College | |
| 45 | 1323 | June-Reg | Chad Faircloth | of | 22 | 6-0 | 180 | L | R | AAA | | University of North Carolina-Asheville | |
