| 1 | 23 | June-Reg | Donnie Bridges | P | 18 | 6-4 | 195 | R | R | AAA | | Oak Grove (Hattiesburg,MS) | $870,000 |
| 1 | 37 | June-Reg | Chris Stowe | P | 18 | 6-3 | 175 | R | R | Rookie | | Chancellor (Fredericksburg,VA) | $497,000 |
| 1 | 38 | June-Reg | Scott Hodges | SS | 18 | 6-0 | 185 | L | R | AAA | - | Henry Clay (Lexington,KY) | $487,500 |
| 1 | 44 | June-Reg | Bryan Hebson | P | 21 | 6-5 | 210 | R | R | MLB | 2003-2003 | Auburn University | $435,000 |
| 1 | 45 | June-Reg | Thomas Pittman | 1B | 17 | 6-4 | 270 | R | R | A+ | | East St. John (Reserve,LA) | $475,000 |
| 1 | 47 | June-Reg | T.J. Tucker | P | 18 | 6-3 | 245 | R | R | MLB | 2000-2005 | River Ridge (New Port Richey,FL) | $410,000 |
| 1 | 48 | June-Reg | Shane Arthurs | P | 17 | 6-5 | 180 | R | R | AA | | Westmoore (Oklahoma City,OK) | $405,000 |
| 1 | 52 | June-Reg | Tootie Myers | OF | 18 | 5-11 | 178 | R | L | AA | | Petal (Petal,MS) | |
| 2 | 74 | June-Reg | Kris Tetz | P | 18 | 6-5 | 245 | R | R | A+ | | Lodi (Lodi,CA) | |
| 3 | 106 | June-Reg | Josh Reding | SS | 20 | 6-3 | 175 | R | R | AAA | | Santiago Canyon College | |
| 4 | 136 | June-Reg | Ronte Langes | OF | | | | | | - | | Whitehaven (Memphis,TN) | |
| 5 | 166 | June-Reg | Julio Perez | P | 18 | 6-2 | 170 | R | R | A+ | | | |
| 6 | 196 | June-Reg | Scott Ackerman | C | 18 | 6-1 | 215 | R | R | AAA | | Oregon City (Oregon City,OR) | |
| 7 | 226 | June-Reg | Tony Caracciolo | SS | 17 | 6-1 | 180 | R | R | A- | | Basic (Henderson,NV) | |
| 8 | 256 | June-Reg | Ryan Becks | P | 21 | 6-3 | 185 | L | L | AAA | | West Valley College | |
| 9 | 286 | June-Reg | Talmadge Nunnari | 1B | 22 | 6-1 | 200 | L | L | MLB | 2000-2000 | Jacksonville University | |
| 10 | 316 | June-Reg | Scott Strickland | P | 21 | 5-11 | 180 | R | R | MLB | 1999-2005 | University of New Mexico | |
| 11 | 346 | June-Reg | Matt Blank | P | 21 | 6-2 | 195 | L | L | MLB | 2000-2001 | Texas A&M University | |
| 12 | 376 | June-Reg | Ryan Van Gilder | p | 21 | 6-0 | 175 | R | R | A+ | | Minnesota State University-Mankato | |
| 13 | 406 | June-Reg | Luis Rivera | C | 19 | 6-3 | 163 | R | R | MLB | 2000-2000 | Florida Southern College | |
| 14 | 436 | June-Reg | Scott Zech | 2B | 23 | 5-10 | 175 | R | R | AAA | | Florida State University | |
| 15 | 466 | June-Reg | Lance Burkhart | C-3B | 22 | 5-9 | 220 | R | R | AAA | | Missouri State University | |
| 16 | 496 | June-Reg | Ryan Saylor | p | 22 | 5-10 | 175 | L | R | AA | | Eastern Kentucky University | |
| 17 | 526 | June-Reg | Spencer Nemer | p | 17 | 6-6 | 230 | R | R | College | | Klein Forest (Houston,TX) | |
| 18 | 556** | June-Reg | Josh Merrigan | p | 19 | 6-4 | 225 | L | L | A+ | | Vermillion (Vermillion,SD) | |
| 19 | 586 | June-Reg | Jonathan Boyett | 2B | | | | | | - | | Modesto Junior College | |
| 20 | 616 | June-Reg | Marcus Bell | p | 18 | 6-2 | 185 | R | R | College | | Monsignor Pace (Miami,FL) | |
| 21 | 646 | June-Reg | Ray Plummer | p | 21 | 5-11 | 190 | L | L | A | | Point Loma Nazarene University | |
| 22 | 676 | June-Reg | Michael Edge | OF | | | | | | Rookie | | North Brunswick (Leland,NC) | |
| 23 | 706 | June-Reg | Matt Coleman | p | | | | | | - | | Centennial (Boring,OR) | |
| 24 | 736 | June-Reg | Tobin Lanzetta | p | 21 | 6-2 | 185 | R | R | A+ | | Santa Clara University | |
| 25 | 766 | June-Reg | Shaun Poole | p | | | | | | - | | Hudson (Hudson,FL) | |
| 26 | 796 | June-Reg | Ralph Harrelson | p | | | | | | A- | | Davis (Modesto,CA) | |
| 27 | 826 | June-Reg | Jason Hoffman | OF | 19 | 6-2 | 195 | R | R | - | | Ohlone College | |
| 28 | 856 | June-Reg | Joseph Fretwell | p | 20 | 6-4 | 175 | B | R | Ind | | Valencia Community College | |
| 29 | 886 | June-Reg | Nathan Cook | 3B | | | | | | - | | Chabot College | |
| 30 | 916 | June-Reg | Derek Smith | SS | | | | | | - | | Tulare Union (Tulare,CA) | |
| 31 | 946** | June-Reg | Jeff Lincoln | p | 19 | 6-2 | 189 | R | R | A+ | | American River College | |
| 32 | 976 | June-Reg | Cory Vandegriff | SS | | | | | | - | | Halls (Knoxville,TN) | |
| 33 | 1006 | June-Reg | Brandt Hayden | SS | | | | | | - | | South Salem (Salem,OR) | |
| 34 | 1036 | June-Reg | Joe Baldassano | p | 17 | 5-11 | 170 | R | R | A- | | | |
| 35 | 1066 | June-Reg | Arthur Anderson | SS | | | | | | - | | East St. John (Reserve,LA) | |
| 36 | 1096 | June-Reg | Samuel Anderson | C | 18 | 5-11 | 188 | R | R | A | | Mesquite (Mesquite,TX) | |
| 37 | 1126 | June-Reg | David Vonah | 3B | | | | | | - | | Hoover (Fresno,CA) | |
| 38 | 1156 | June-Reg | Edwin Gomez | Of | | | | | | - | | Teodoro Aguilar Mora (Yabucoa,PR) | |
| 39 | 1186 | June-Reg | James McKnight | C | | | | | | - | | Washington (Phoenix,AZ) | |
| 40 | 1216 | June-Reg | John White | C | | | | | | A | | Jacksonville University | |
| 41 | 1243 | June-Reg | Luis Martinez | C | | | | | | - | | Jose Campeche (San Lorenzo,PR) | |
| 42 | 1269 | June-Reg | Kevin Harmon | C | | | | | | - | | Palmdale (Palmdale,CA) | |
| 43 | 1293 | June-Reg | Josh Laidlaw | of | | | | | | College | | Cheyenne (North Las Vegas,NV) | |
| 44 | 1315 | June-Reg | Matthew Baird | of | 19 | 6-0 | 180 | L | R | Ind | | | |
| 45 | 1336 | June-Reg | Mechel Elam | of | | | | | | - | | Eisenhower (Rialto,CA) | |
| 46 | 1355 | June-Reg | Brian Oxley | SS | | | | | | - | | Los Medanos College | |
| 47 | 1373 | June-Reg | Matthew Cody | C | | | | | | - | | Woodlawn (Baton Rouge,LA) | |
| 48 | 1390 | June-Reg | Chris Herman | SS | | | | | | - | | South Hills (Covina,CA) | |
| 49 | 1407 | June-Reg | Dean Harper | C | | | | | | - | | | |