| 1 | 7 | June-Reg | Dan Reichert | P | 20 | 6-3 | 175 | R | R | MLB | 1999-2003 | University of the Pacific | $1,450,000 |
| 2 | 59** | June-Reg | Dane Sardinha | C | 18 | 5-11 | 215 | R | R | MLB | 2003-2009 | Kamehameha (Kahuku,HI) | |
| 3 | 91 | June-Reg | Jeremy Affeldt | P | 18 | 6-4 | 185 | L | L | MLB | 2002-2009 | Northwest Christian (Spokane,WA) | |
| 4 | 121 | June-Reg | Goef Tomlinson | OF | 20 | 6-1 | 190 | L | L | AAA | | University of Houston | |
| 5 | 151 | June-Reg | Jason Gooding | | 22 | 5-11 | 190 | R | L | AAA | | Texas Tech University | |
| 6 | 181** | June-Reg | Jason Anderson | P | 18 | 6-0 | 170 | R | R | MLB | 2003-2005 | Danville (Danville,IL) | |
| 7 | 211 | June-Reg | Joe Dillon | 1B | 21 | 6-2 | 205 | R | R | MLB | 2005-2009 | Texas Tech University | |
| 8 | 241 | June-Reg | Eric Yanz | P | 22 | 6-3 | 210 | R | R | A | | Kansas State University | |
| 9 | 271 | June-Reg | Kris Wilson | P | 20 | 6-3 | 225 | R | R | MLB | 2000-2006 | Georgia Tech | |
| 10 | 301 | June-Reg | David Willis | 1B | 22 | 6-5 | 240 | R | R | AA | | University of California-Santa Barbara | |
| 11 | 331 | June-Reg | Joe Caruso | 2B | 22 | 5-9 | 190 | R | R | AAA | | University of Alabama | |
| 12 | 361 | June-Reg | Jason Gilfillan | p | 20 | 6-5 | 220 | R | R | MLB | 2003-2003 | Limestone College | |
| 13 | 391 | June-Reg | Ryan Douglass | p | 18 | 6-3 | 210 | R | R | AA | | Bishop Canevin Catholic (Pittsburgh,PA) | |
| 14 | 421 | June-Reg | Tony Mancha | p | 18 | 6-2 | 200 | B | R | A | | Las Cruces (Las Cruces,NM) | |
| 15 | 451 | June-Reg | Justin Pederson | p | 22 | 6-1 | 190 | R | R | A+ | | University of Minnesota | |
| 16 | 481 | June-Reg | Rolando Geigel | p | 17 | 6-2 | 190 | R | R | A+ | | Georgina Vaquaro (Canovanas,PR) | |
| 17 | 511 | June-Reg | Justin Lamber | p | 21 | 6-0 | 210 | L | L | AA | | University of Richmond | |
| 18 | 541 | June-Reg | Bruce Stanley | p | | | | | | - | | Ball State University | |
| 19 | 571 | June-Reg | Tarik Graham | OF | | | | | | Rookie | | Edgewater (Orlando,FL) | |
| 20 | 601 | June-Reg | Carlos Pagan | C | 21 | 5-9 | 190 | R | R | A+ | | University of Mobile | |
| 21 | 631 | June-Reg | Rod Metzler | 2B | 22 | 5-11 | 185 | B | R | AA | | Purdue University | |
| 22 | 661 | June-Reg | James Woods | C | | | | | | Rookie | | Muskegon (Muskegon,MI) | |
| 23 | 691 | June-Reg | Rickey Crutchley | p | 18 | 6-0 | 160 | R | L | Rookie | | Etowah (Woodstock,GA) | |
| 24 | 721 | June-Reg | Cameron Tillis | OF | | | | | | Rookie | | Lurleen B. Wallace Community College | |
| 25 | 751** | June-Reg | Ryan Hutchison | p | 18 | 6-0 | 205 | R | R | AAA | | Lincoln (Vincennes,IN) | |
| 26 | 781 | June-Reg | Michael Perkins | p | | | | | | - | | Charlotte (Punta Gorda,FL) | |
| 27 | 811** | June-Reg | Fontella Jones | p | 22 | 6-2 | 210 | R | R | A+ | | Mississippi Gulf Coast Community College | |
| 28 | 841 | June-Reg | Aaron Carter | p | 22 | 6-2 | 190 | R | R | A | | St. Mary's University | |
| 29 | 871 | June-Reg | Dave Ullery | C | 22 | 6-3 | 220 | L | R | AAA | | Indiana State University | |
| 30 | 901 | June-Reg | Robert Balezentis | p | | | | | | - | | Mercyhurst College | |
| 31 | 931 | June-Reg | George Petticrew | p | | | | | | - | | Lakeside (Nine Mile,WA) | |
| 32 | 961 | June-Reg | Kyle Turner | p | 18 | 6-2 | 215 | L | L | A | | | |
| 33 | 991 | June-Reg | Nelson Bellido | p | | | | | | - | | | |
| 34 | 1021 | June-Reg | Freddie Fincher | C | | | | | | - | | Galveston College | |
| 35 | 1051 | June-Reg | John Hale | p | | | | | | - | | Lee (Midland,TX) | |
| 36 | 1081 | June-Reg | Donny Davis | p | | | | | | - | | El Cerrito (El Cerrito,CA) | |
| 37 | 1111 | June-Reg | John Majors | p | | | | | | - | | Flomaton (Flomaton,AL) | |
| 38 | 1141 | June-Reg | John Raymer | p | | | | | | - | | West Orange-Stark (Orange,TX) | |
| 39 | 1171** | June-Reg | Aaron Melebeck | SS | 19 | 5-11 | 175 | R | R | A- | | Galveston College | |
| 40 | 1201 | June-Reg | Kendall Thomas | C | | | | | | - | | Gloucester County College | |
| 41 | 1231** | June-Reg | Chris Sampson | SS | 19 | 6-0 | 170 | R | R | MLB | 2006-2009 | Lon Morris College | |
| 42 | 1258 | June-Reg | Chris Tallman | of | 19 | 6-6 | 235 | L | R | College | | Santiago Canyon College | |
| 43 | 1282 | June-Reg | Quentin Elder | p | | | | | | - | | Castlemont (Oakland,CA) | |
| 44 | 1305 | June-Reg | Daniel Martinez | p | | | | | | - | | Sweetwater (National City,CA) | |
| 45 | 1326 | June-Reg | Bret Halbert | p | | | | | | - | | Cypress College | |
| 46 | 1346 | June-Reg | Gary Schulz | p | | | | | | - | | Montgomery (Montgomery,TX) | |
| 47 | 1365 | June-Reg | Mark Villarreal | C | | | | | | - | | Dulles (Sugar Land,TX) | |
| 48 | 1383** | June-Reg | Matt Williams | 3B | 18 | 6-1 | 210 | R | R | A+ | | Millikan (Long Beach,CA) | |
| 49 | 1400 | June-Reg | Carlos Spikes | of | | | | | | - | | North Florida Christian (Tallahassee,FL) | |