| 1 | 3 | June-Reg | Troy Glaus | 3B | 20 | 6-5 | 229 | R | R | MLB | 1998-2009 | UCLA | $2,250,000 |
| 3 | 87 | June-Reg | Heath Timmerman | P | 19 | 6-2 | 190 | R | R | A | | Northeastern Oklahoma A&M College | |
| 4 | 117 | June-Reg | Joe Gangemi | P | 21 | 6-3 | 190 | R | L | A+ | | Seton Hall University | |
| 5 | 147 | June-Reg | Mike Brunet | P | 20 | 6-2 | 185 | R | R | AAA | | Pasco-Hernando Community College | |
| 6 | 177 | June-Reg | Matt Wise | P | 21 | 6-4 | 190 | R | R | MLB | 2000-2008 | Cal State Fullerton | |
| 7 | 207 | June-Reg | Matt Garrick | OF | 21 | 6-0 | 185 | R | R | AAA | - | Texas A&M University | |
| 8 | 237 | June-Reg | Ryan Cummings | P | 21 | 6-2 | 210 | R | R | AAA | | Georgia Southern University | |
| 9 | 267 | June-Reg | Dwayne Dobson | P | 21 | 6-5 | 200 | R | R | A | | University of South Florida | |
| 10 | 297 | June-Reg | Steve Green | P | 19 | 6-2 | 195 | R | R | MLB | 2001-2001 | Fort Scott Community College | |
| 11 | 327 | June-Reg | Brian Tokarse | P | 22 | 6-3 | 200 | R | R | AA | | Cal State Fullerton | |
| 12 | 357 | June-Reg | Felipe Alou | OF | 18 | 5-11 | 165 | R | R | AAA | | Canada College | |
| 13 | 387 | June-Reg | Doug Nickle | p | 22 | 6-4 | 210 | R | R | MLB | 2000-2002 | University of California | |
| 14 | 417 | June-Reg | Adam Leggett | 2B | 21 | 6-0 | 190 | B | R | AA | | Georgia Tech | |
| 15 | 447 | June-Reg | Brent Wagler | p | | | | | | - | | Florida Southern College | |
| 16 | 477 | June-Reg | Casey Child | OF | 21 | 6-2 | 185 | R | R | A | | University of Utah | |
| 17 | 507 | June-Reg | Keith Medosch | SS | 22 | 5-11 | 175 | R | R | A | | University of North Florida | |
| 18 | 537 | June-Reg | Mike O'Keefe | OF | 19 | 5-10 | 205 | L | L | AAA | | Notre Dame (Fairfield,CT) | |
| 19 | 567 | June-Reg | Bo Donaldson | p | 22 | 6-2 | 200 | R | R | AAA | | University of Tampa | |
| 20 | 597 | June-Reg | Jaymie Bane | p | 22 | 5-11 | 170 | R | L | A+ | | Arizona State University | |
| 21 | 627 | June-Reg | Mike Colangelo | OF | 20 | 6-1 | 185 | R | R | MLB | 1999-2002 | George Mason University | |
| 22 | 657 | June-Reg | Steve Fish | p | | | | | | AA | | University of Nebraska | |
| 23 | 687 | June-Reg | Jake Brooks | p | 19 | 6-1 | 200 | R | R | AAA | | Polk State College | |
| 24 | 717 | June-Reg | Ernie Mller | p | | | | | | - | | Methodist University | |
| 25 | 747 | June-Reg | Jeb Dougherty | OF | 21 | 6-0 | 180 | R | R | AA | | University of San Diego | |
| 26 | 777 | June-Reg | Tim Adams | 1B | 22 | 6-3 | 225 | R | R | Rookie | | University of California-Davis | |
| 27 | 807** | June-Reg | David Walling | p | 18 | 6-6 | 200 | R | R | AAA | | Grossmont College | |
| 28 | 837 | June-Reg | Rogier Vandepohl | SS | | | | | | - | | Indian River State College | |
| 29 | 867 | June-Reg | Mike Condon | SS | 23 | 5-10 | 180 | R | R | A | | Seton Hall University | |
| 30 | 897 | June-Reg | Oscar Betancourt | 3B | 21 | 6-1 | 200 | R | R | A | | Cal Poly Pomona | |
| 31 | 927 | June-Reg | Steve Hagins | OF | 22 | 6-1 | 205 | R | R | AA | | San Diego State University | |
| 32 | 957 | June-Reg | Ben Talbott | 3B | 22 | 6-2 | 215 | B | R | Rookie | | Lehigh University | |
| 33 | 987 | June-Reg | Eric Easton | p | 18 | 6-7 | 220 | R | R | Ind | | East Lake (Tarpon Springs,FL) | |
| 34 | 1017 | June-Reg | Peter Quittner | Of | 22 | 6-2 | 190 | L | R | Rookie | | University of San Francisco | |
| 35 | 1047 | June-Reg | Graham McAlister | C-1B | | | | | | - | | Lyons (Lyons,KS) | |
| 36 | 1077 | June-Reg | Casey Martin | C | 21 | 6-2 | 220 | R | R | A | | Long Beach State University | |
| 37 | 1107 | June-Reg | Richard Stegbauer | C | | | | | | Ind | | Edison State College | |
| 38 | 1137 | June-Reg | Scot Shields | p | 21 | 6-1 | 175 | R | R | MLB | 2001-2009 | Lincoln Memorial University | |
| 39 | 1167 | June-Reg | Ben Saxon | p | | 6-3 | 217 | R | R | - | | Chipola College | |
| 40 | 1197 | June-Reg | Jullian Harris | p | 19 | 6-3 | 175 | L | L | A+ | | West Valley College | |
| 41 | 1227** | June-Reg | Josh Pearce | p | 19 | 6-3 | 215 | R | R | MLB | 2002-2004 | Centralia College | |
| 42 | 1254 | June-Reg | Jay Nunley | of | | | | | | A- | | University of North Florida | |
| 43 | 1278 | June-Reg | Ryan Bast | SS-2B | 18 | 5-10 | 160 | R | R | Rookie | | Sierra College | |
| 44 | 1301 | June-Reg | Brad Brewer | SS | 21 | 5-10 | 170 | R | R | A | | University of Miami | |
| 45 | 1322 | June-Reg | Wesley Crawford | p | 20 | 6-3 | 200 | B | L | A+ | | Polk State College | |
| 46 | 1343 | June-Reg | Matt Steele | p | 20 | 6-1 | 212 | R | R | A | | Chipola College | |
| 47 | 1362 | June-Reg | Jeff Kaita | p | 18 | 6-1 | 210 | R | R | - | | Colfax (Colfax,CA) | |
| 48 | 1380 | June-Reg | Aaron Porter | p | 22 | 6-1 | 185 | R | R | A | | St. Mary's College of California | |
| 49 | 1397 | June-Reg | Daniel Kerrigan | C | | | | | | - | | State College of Florida, Manatee-Sarasota | |
| 50 | 1414 | June-Reg | Sheldon Philip-Guide | of | 23 | 6-0 | 208 | R | R | A | | Glendale Community College | |
| 51 | 1429 | June-Reg | William Hays | of | | | | | | - | | Garrett College | |
| 52 | 1443** | June-Reg | Ben Margalski | C | 17 | 6-2 | 210 | L | R | A+ | | Northwest (House Springs,MO) | |
| 53 | 1457 | June-Reg | Steve Ahlers | SS | 18 | 6-0 | 175 | R | R | A | | Livermore (Livermore,CA) | |
| 54 | 1470 | June-Reg | Shamar Cotton | p | | | | | | - | | Skyline (Oakland,CA) | |
| 55 | 1481 | June-Reg | Brian Sullivan | p | | | | | | - | | Booker (Sarasota,FL) | |
| 56 | 1492 | June-Reg | Gilberto Pichardo | of | 18 | 6-1 | 195 | B | R | Rookie | | South Shore (Brooklyn,NY) | |
| 57 | 1503 | June-Reg | Ron Ricks | p | 22 | 6-5 | 225 | R | R | A | | University of West Florida | |
| 58 | 1514 | June-Reg | Lamar Harvey | p | | | | | | - | | Fremont (Oakland,CA) | |
| 59 | 1525** | June-Reg | Jake Mapes | of | 18 | 6-4 | 210 | R | R | A+ | - | Hemet (Hemet,CA) | |
| 60 | 1534 | June-Reg | Alexis Acosta | SS | | | | | | - | | Polk State College | |