| 1 | 23 | June-Reg | Damian Rolls | 3B | 18 | 6-2 | 205 | R | R | MLB | 2000-2004 | Schlagel (Kansas City,KS) | $895,000 |
| 2 | 58 | June-Reg | Josh Glassey | OF | 19 | 6-1 | 190 | L | R | AA | | Mission Bay (San Diego,CA) | |
| 3 | 88 | June-Reg | Alex Cora | SS | 20 | 6-0 | 180 | L | R | MLB | 1998-2009 | University of Miami | |
| 4 | 118 | June-Reg | Peter Bergeron | OF | 18 | 6-0 | 185 | L | R | MLB | 1999-2004 | Greenfield (Greenfield,MA) | |
| 5 | 148 | June-Reg | Nick Leach | 1B | 18 | 6-1 | 190 | L | R | AA | | Madera (Madera,CA) | |
| 6 | 178 | June-Reg | Jack Jones | SS | 21 | 5-10 | 180 | R | R | AAA | | Cal State Fullerton | |
| 7 | 208 | June-Reg | Ben Simon | P | 21 | 6-1 | 185 | R | R | AAA | | Eastern Michigan University | |
| 8 | 238 | June-Reg | Chris Karabinus | P | 21 | 6-3 | 220 | R | L | A- | | Towson University | |
| 9 | 268 | June-Reg | David Falcon | OF | | | | | | - | | | |
| 10 | 298 | June-Reg | Jeff Auterson | OF | 18 | 6-2 | 190 | R | R | A+ | | Norte Vista (Riverside,CA) | |
| 11 | 328 | June-Reg | Jason Walters | P | 18 | 6-3 | 235 | R | R | A- | | Meridian Community College | |
| 12 | 358 | June-Reg | Randy Stearns | OF | | | | | | A | | University of Wisconsin-River Falls | |
| 13 | 388 | June-Reg | Derrick Peoples | OF | 18 | 6-2 | 190 | B | R | A- | | Ryan (Denton,TX) | |
| 14 | 418 | June-Reg | Willie King | 1B | 18 | 6-1 | 210 | L | R | A | | Roosevelt (Brooklyn,NY) | |
| 15 | 448 | June-Reg | Casey Snow | OF | 21 | 5-10 | 185 | B | R | AAA | | Long Beach State University | |
| 16 | 478 | June-Reg | Matt Kramer | p | 20 | 6-1 | 200 | R | R | A+ | | Moorpark College | |
| 17 | 508 | June-Reg | Mikal Richey | OF | 17 | 5-10 | 185 | R | R | Rookie | | Columbia (Decatur,GA) | |
| 18 | 538 | June-Reg | Pedro Flores | p | 19 | 6-0 | 201 | L | L | AAA | | East Los Angeles College | |
| 19 | 568 | June-Reg | Mickey Maestas | p | 20 | 6-3 | 195 | R | R | A- | | George Mason University | |
| 20 | 598 | June-Reg | Ismael Gallo | SS | 19 | 5-11 | 165 | L | R | A+ | | Mount San Antonio College | |
| 21 | 628 | June-Reg | Kimani Newton | OF | 17 | 6-1 | 195 | R | R | A+ | | St. Joseph (St. Croix,VI) | |
| 22 | 658 | June-Reg | Elvis Correa | p | 17 | 6-2 | 200 | R | R | A+ | | South Division (Milwaukee,WI) | |
| 23 | 688 | June-Reg | Ted Lilly | p | 20 | 6-0 | 185 | L | L | MLB | 1999-2009 | Fresno City College | |
| 24 | 718 | June-Reg | Pat Kelleher | OF | 19 | 6-1 | 185 | L | R | A+ | | Osceola (Kissimmee,FL) | |
| 25 | 748 | June-Reg | Scott Morrison | SS | | | | | | A | | Baylor University | |
| 26 | 778 | June-Reg | Monte Marshall | 2B | 22 | 5-7 | 155 | B | R | A+ | | Birmingham-Southern College | |
| 27 | 808 | June-Reg | Steve Wilson | C | 22 | 5-11 | 200 | R | R | - | | Georgia Southern University | |
| 28 | 838 | June-Reg | Brian Zaun | OF | | | | | | A | | Butler University | |
| 29 | 868 | June-Reg | Toby Dollar | p | 21 | 6-3 | 215 | R | R | AAA | | Texas Christian University | |
| 30 | 898 | June-Reg | Rick Saitta | 2B-SS | 20 | 5-10 | 170 | R | R | AAA | | Rutgers University | |
| 31 | 928 | June-Reg | Brian Foulks | OF | 22 | 6-3 | 205 | R | R | A | | Benedict College | |
| 32 | 958 | June-Reg | Brian Sankey | 1B | 22 | 6-1 | 195 | L | L | A+ | | Boston College | |
| 33 | 988 | June-Reg | Brian Jacobson | p | 21 | 6-0 | 190 | B | L | A | | California Baptist University | |
| 34 | 1018** | June-Reg | Brad Cresse | C | 17 | 6-2 | 230 | R | R | AAA | | Marina (Huntington Beach,CA) | |
| 35 | 1048 | June-Reg | Donnie Thomas | p | | | | | | - | | Andrew College | |
| 36 | 1078 | June-Reg | Wayne Franklin | p | 22 | 6-2 | 195 | L | L | MLB | 2000-2006 | University of Maryland | |
| 37 | 1108** | June-Reg | Jim Fritz | C | 21 | 6-0 | 215 | R | R | - | | University of Tennessee | |
| 38 | 1138 | June-Reg | Jeff Kubenka | p | 21 | 6-1 | 191 | R | L | MLB | 1998-1999 | St. Mary's University | |
| 39 | 1168 | June-Reg | Bryan Cranson | p | | | | | | College | | Bronson (Bronson,MI) | |
| 40 | 1198 | June-Reg | Frank Thompson | p | 23 | 6-1 | 190 | R | R | A+ | | Embry-Riddle University | |
| 41 | 1227 | June-Reg | Jason Weekley | of | 22 | 6-3 | 190 | R | R | A+ | | St. Mary's College of California | |
| 42 | 1255 | June-Reg | Jacob Allen | of | 18 | 6-3 | 210 | R | R | Rookie | | Southeastern Illinois College | |
| 43 | 1282 | June-Reg | Kevin Culmo | p | 21 | 6-2 | 190 | R | R | A- | | Sacramento State | |
| 44 | 1308 | June-Reg | Eddie Sordo | p | | | | | | College | | Jacksonville University | |
| 45 | 1334 | June-Reg | Erik Lazerus | SS | 23 | 5-8 | 160 | R | R | Ind | | Chico State | |
| 46 | 1359 | June-Reg | Bradley Turner | of | | | | | | - | | Belton (Belton,TX) | |
| 47 | 1383 | June-Reg | Eric Lovinger | p | 23 | 6-3 | 205 | R | R | A- | | Oregon State University | |
| 48 | 1406 | June-Reg | Neal Hannah | p | 21 | 6-2 | 206 | R | R | A- | | Mercer University | |
| 49 | 1429 | June-Reg | Peter Brinjak | p | | | | | | - | | Michael Power-St. Josephs (Etobicoke,ON) | |
| 50 | 1452 | June-Reg | Brian Paluk | p | 20 | 6-6 | 225 | R | R | A+ | | Michigan State University | |
| 51 | 1473 | June-Reg | Doug Straight | p | | | | | | College | | Buckhannon-Upshur (Buckhannon,WV) | |
| 52 | 1492 | June-Reg | Dean Mitchell | p | 22 | 5-11 | 175 | R | R | AAA | | Texas A&M University | |
| 53 | 1509 | June-Reg | Blake Mayo | p | 23 | 6-2 | 210 | R | R | AAA | | University of Alabama-Birmingham | |
| 54 | 1525 | June-Reg | James Jackson | of | | | | | | - | | Kankakee (Kankakee,IL) | |
| 55 | 1541** | June-Reg | Adam Flohr | p | 19 | 6-0 | 185 | L | L | AAA | | Spokane Falls Community College | |
| 56 | 1556 | June-Reg | Spencer Micunek | p | | | | | | - | | Kalamazoo Valley Community College | |
| 57 | 1567 | June-Reg | Ryan Anholt | 2B | 20 | 5-11 | 190 | L | R | Ind | | Kwantlen College | |
| 58 | 1577 | June-Reg | Brian Little | 3B | | | | | | - | | College of the Sequoias | |
| 59 | 1587 | June-Reg | J.C. Huguet | C | 18 | 6-2 | 210 | R | R | A+ | | Coral Park (Miami,FL) | |
| 60 | 1596 | June-Reg | Craig Jarvis | of | | | | | | - | | Claremon Secondary (Victoria,BC) | |
| 61 | 1604** | June-Reg | Kevin Sullivan | C | 18 | 6-1 | 210 | R | R | AAA | | Pacelli (Stevens Point,WI) | |
| 62 | 1611 | June-Reg | Mark Paschal | of | | | | | | - | | Chaffey College | |
| 63 | 1618** | June-Reg | George Bailey | 3B | | | | | | - | | St. Joseph (St. Croix,VI) | |
| 64 | 1623 | June-Reg | Joseph Thomas | p | | | | | | - | | Mount San Antonio College | |
| 65 | 1628 | June-Reg | Devin Helps | p | | | | | | - | | McClung Collegiate (Maniton,MB) | |
| 66 | 1633 | June-Reg | Travis Bolton | of | | | | | | - | | West Valley (Cottonwood,CA) | |
| 67 | 1638** | June-Reg | Graig Merritt | of | 17 | 6-1 | 195 | R | R | AA | | Terry Fox (Pitt Meadows,BC) | |
| 68 | 1643 | June-Reg | Samuel Shelton | p | 18 | 6-3 | 180 | R | R | - | | Durango (Durango,CO) | |
| 69 | 1648** | June-Reg | Mike Meyer | SS | 18 | 6-2 | 180 | R | R | A+ | | Sabino (Tucson,AZ) | |
| 70 | 1653 | June-Reg | Matt Mason | C | 18 | 6-2 | 220 | R | R | Ind | | J.L. Crowe (Trail,BC) | |
| 71 | 1658 | June-Reg | Kevin Huff | p | 18 | 6-0 | 180 | R | R | - | | Horizon (Scottsdale,AZ) | |
| 72 | 1663** | June-Reg | Eric Bruntlett | SS | 18 | 6-0 | 200 | R | R | MLB | 2003-2009 | Harrison (West Lafayette,IN) | |
| 73 | 1668 | June-Reg | Edgar Rodriguez | 1B | 16 | 5-11 | 150 | R | R | A+ | | | |
| 74 | 1673** | June-Reg | Ryan Withey | SS | 18 | 6-2 | 195 | R | R | A | | Mainland (Daytona Beach,FL) | |
| 75 | 1678 | June-Reg | Paul Sirant | p | | | | | | - | | River East Collegiate (Winnipeg,MB) | |
| 76 | 1682 | June-Reg | Chad Zaniewski | of | | | | | | - | | John Leonard (Greenacres,FL) | |
| 77 | 1686 | June-Reg | Richard Garner | C | | | | | | - | | Wade Hampton (Orangeburg,SC) | |
| 78 | 1690 | June-Reg | Jim Davis | 1B | | | | | | - | | Berrien (Nashville,GA) | |
| 79 | 1694 | June-Reg | Rabell Rivera | SS | | | | | | - | | Lake Land College | |