| 1 | 19 | June-Reg | Bret Wagner | P | 21 | 6-0 | 190 | L | L | AA | | Wake Forest University | $525,000 |
| 2 | 53 | June-Reg | Carl Dale | P | 21 | 6-2 | 215 | R | R | MLB | 1999-1999 | Winthrop University | $150,000 |
| 3 | 82 | June-Reg | Corey Avrard | P | 17 | 6-4 | 190 | R | R | AA | | | |
| 4 | 110 | June-Reg | Yates Hall | P | 21 | 6-2 | 190 | R | R | AA | | University of Virginia | |
| 5 | 138 | June-Reg | Curtis King | P | 23 | 6-5 | 205 | R | R | MLB | 1997-1999 | Philadelphia University | |
| 6 | 166 | June-Reg | Blake Stein | P | 20 | 6-7 | 240 | R | R | MLB | 1998-2002 | Spring Hill College | |
| 7 | 194 | June-Reg | Richard Mear | P | 18 | 6-3 | 218 | L | L | A- | | Rowland (Rowland Heights,CA) | |
| 8 | 222 | June-Reg | Kevin Foderaro | P | 21 | 6-3 | 215 | R | R | A | | Brigham Young University | |
| 9 | 250 | June-Reg | Antonio Abell | OF | 19 | 5-10 | 175 | R | R | A | | Meade County (Bradensburg,KY) | |
| 10 | 278** | June-Reg | Bruce Thompson | OF | | | | | | A | | University of Miami | |
| 11 | 306** | June-Reg | Dan Reichert | P | 17 | 6-3 | 175 | R | R | MLB | 1999-2003 | Turlock (Turlock,CA) | |
| 12 | 334** | June-Reg | John Bale | p | 20 | 6-4 | 220 | L | L | MLB | 1999-2009 | Jefferson Davis Community College | |
| 13 | 362** | June-Reg | Ryan Freel | SS | 18 | 5-10 | 185 | R | R | MLB | 2001-2009 | Englewood (Jacksonville,FL) | |
| 14 | 390 | June-Reg | Pete Ambrosina | 2B | | | | | | A | | Lincoln Memorial University | |
| 15 | 418** | June-Reg | Brandon Parker | p | 18 | 6-1 | 200 | R | R | A+ | | Long Beach (Long Beach,MS) | |
| 16 | 446 | June-Reg | Sean Garman | 1B-3b | | | | | | A- | | College of Southern Idaho | |
| 17 | 474 | June-Reg | Mark Roettgen | p | 17 | 6-5 | 213 | R | R | A | | Jefferson City (Jefferson City,MO) | |
| 18 | 502 | June-Reg | Marcus Logan | p | 22 | 6-0 | 170 | R | R | AA | | Murray State University | |
| 19 | 530 | June-Reg | Placido Polanco | SS | 18 | 5-10 | 168 | R | R | MLB | 1998-2009 | Miami-Dade College | |
| 20 | 558 | June-Reg | Jerome Robinson | OF | | | | | | - | | Taft College | |
| 21 | 586** | June-Reg | Kyle Wagner | C | | | | | | A- | | Wake Forest University | |
| 22 | 614 | June-Reg | Jose Leon | 3B | 17 | 6-0 | 175 | R | R | MLB | 2002-2004 | | |
| 23 | 642 | June-Reg | Ryan Hall | C | | | | | | A+ | | Brigham Young University | |
| 24 | 670 | June-Reg | Keith McDonald | OF | 21 | 6-2 | 215 | R | R | MLB | 2000-2001 | Pepperdine University | |
| 25 | 698 | June-Reg | Kevin Lovingier | p | 22 | 6-1 | 190 | L | L | AAA | | University of Oklahoma | |
| 26 | 726 | June-Reg | Steve Reed | p | 18 | 6-2 | 205 | R | R | AA | | Palm Beach Lakes (West Palm Beach,FL) | |
| 27 | 754 | June-Reg | Manuel Mendez | p | 20 | 6-0 | 190 | L | L | A+ | | Fresno City College | |
| 28 | 782 | June-Reg | Rich Hartmann | p | | | | | | A+ | | Long Island University-Brooklyn Campus | |
| 29 | 810 | June-Reg | Steve Frascatore | p | | | | | | A- | | C.W. Post Campus/Long Island University | |
| 30 | 838 | June-Reg | Adam West | p | 20 | 6-1 | 185 | L | L | A+ | | Pierce College | |
| 31 | 866 | June-Reg | Mike McDougal | 1B | 19 | 6-4 | 210 | L | R | AAA | | Taft College | |
| 32 | 894 | June-Reg | Miguel Rivera | SS | 20 | 5-10 | 175 | R | R | AA | | Lincoln Memorial University | |
| 33 | 922 | June-Reg | Hector Rodriguez | 3B | | | | | | A- | | Florida Memorial University | |
| 34 | 950 | June-Reg | Kevin McNeill | p | 23 | 6-4 | 210 | R | L | - | | McNeese State University | |
| 35 | 978 | June-Reg | Jody Crump | p | 21 | 6-6 | 210 | L | L | A | | Volunteer State Community College | |
| 36 | 1006 | June-Reg | Efrain Contreras | Of | 21 | 5-11 | 190 | L | R | A+ | | Texas A&M University | |
| 37 | 1034 | June-Reg | Scott Cunningham | p | | | | | | A- | | University of Arkansas | |
| 38 | 1062 | June-Reg | Tommy Minor | p | | | | | | A | | Fresno State University | |
| 39 | 1090 | June-Reg | Darren Tawwater | C | | | | | | Rookie | | Texas Christian University | |
| 40 | 1117 | June-Reg | Bo Johnson | p | | | | | | Rookie | | Rice University | |
| 41 | 1143 | June-Reg | Robert Helvey | p | | | | | | A | | Missouri Baptist University | |
| 42 | 1169 | June-Reg | Keith Glauber | p | 22 | 6-2 | 190 | R | R | MLB | 1998-2000 | Montclair State University | |
| 43 | 1195 | June-Reg | Rodger Harris | 2B-of | | | | | | A | | Tulare Union (Tulare,CA) | |
| 44 | 1221 | June-Reg | Chris Arambula | 1B | | | | | | Rookie | | University of Utah | |
| 45 | 1247 | June-Reg | Steve Abbs | of | | | | | | Rookie | | University of Wyoming | |
| 46 | 1271 | June-Reg | Matthew Golden | p | 22 | 6-3 | 190 | R | R | AA | | Princeton University | |
| 47 | 1294 | June-Reg | Dennis McCaffrey | p | | | | | | Rookie | | Pemberton Township (Pemberton,NJ) | |
| 48 | 1315** | June-Reg | Jacob Whitfield | p | 18 | 6-2 | 200 | L | L | Rookie | | Florida State University (Tallahassee,FL) | |
| 49 | 1335 | June-Reg | Nakia Hill | 2B | 18 | 6-0 | 175 | R | R | A+ | | Crawford (San Diego,CA) | |
| 50 | 1355 | June-Reg | Andre Hall | C | 20 | 6-0 | 175 | B | R | A+ | | St. Augustine (New Orleans,LA) | |
| 51 | 1375 | June-Reg | Robert Smoker | C | | | | | | - | | Manheim Central (Manheim,PA) | |
| 52 | 1395 | June-Reg | Calvin Coach | of | | | | | | A | | University of South Carolina-Aiken | |
| 53 | 1414** | June-Reg | Mike Wolger | p | 21 | 6-1 | 215 | L | L | A+ | | University of California | |
| 54 | 1433 | June-Reg | Mark McWilliams | p | | | | | | - | | University of North Carolina-Charlotte | |
| 55 | 1450 | June-Reg | Clarence Johns | p | | | | | | Rookie | | Southern University | |
| 56 | 1466 | June-Reg | Christian Reinheimer | p | | | | | | Rookie | | University of the Pacific | |
| 57 | 1482 | June-Reg | Jack Moore | p | | | | | | - | | Zapata (Zapata,TX) | |
| 58 | 1498 | June-Reg | Jason Riley | of | | | | | | - | | Lee (Baytown,TX) | |
| 59 | 1513 | June-Reg | Duston Atkinson | C-of | | | | | | - | | Dixie State College of Utah | |
| 60 | 1526 | June-Reg | Jarrod DeGeorgia | p | | | | | | - | | Santa Barbara City College | |
| 61 | 1539** | June-Reg | Eric Fuller | SS | | | | | | - | | Bakersfield College | |
| 62 | 1551** | June-Reg | Mike Glendenning | 3B-of | 17 | 6-0 | 200 | R | R | AAA | | Crespi Carmelite (Encino,CA) | |
| 63 | 1563 | June-Reg | Gene Moseley | p | | | | | | - | | Deer Park (Deer Park,TX) | |