| 1 | 17 | June-Reg | Ramon Castro | C | 18 | 6-3 | 225 | R | R | MLB | 1999-2009 | | $450,000 |
| 1 | 25 | June-Reg | Scott Elarton | P | 18 | 6-7 | 240 | R | R | MLB | 1998-2008 | Lamar (Lamar,CO) | $750,000 |
| 1 | 30 | June-Reg | Russ Johnson | SS | 21 | 5-10 | 180 | R | R | MLB | 1997-2005 | Louisiana State University | $335,000 |
| 2 | 51 | June-Reg | Dan Lock | P | 21 | 6-5 | 210 | R | L | AA | | Yale University | $205,000 |
| 3 | 80 | June-Reg | Oscar Robles | SS | 18 | 5-11 | 155 | L | R | MLB | 2005-2007 | Montgomery (San Diego,CA) | |
| 4 | 108 | June-Reg | Paul O'Malley | P | 21 | 6-2 | 180 | R | R | AA | | Illinois State University | |
| 5 | 136 | June-Reg | Mike Gunderson | P | 21 | 6-4 | 235 | R | R | A+ | | North Dakota State University | |
| 6 | 164 | June-Reg | Shane Barksdale | OF | 17 | 6-4 | 195 | L | R | A+ | | Etowah (Attalla,AL) | |
| 7 | 192 | June-Reg | Tony Mounce | P | 19 | 6-2 | 170 | L | L | MLB | 2003-2003 | Kamiakin (Kennewick,WA) | |
| 8 | 220 | June-Reg | Derek Dace | P | 19 | 6-7 | 200 | L | L | AAA | | Sullivan (Sullivan,MO) | |
| 9 | 248 | June-Reg | Wes Pratt | OF | 20 | 6-3 | 180 | R | R | A+ | | North Carolina Wesleyan College | |
| 10 | 276 | June-Reg | Roy Marsh | OF | 20 | 5-8 | 191 | R | R | A+ | | Ohio State University | |
| 11 | 304 | June-Reg | Bob Palithorpe | P | 21 | 6-1 | 210 | R | R | A- | | Santa Clara University | |
| 12 | 332 | June-Reg | Hassan Robinson | OF | 21 | 6-3 | 180 | R | R | AA | | Springfield College | |
| 13 | 360 | June-Reg | Victor Sanchez | OF | 22 | 5-10 | 180 | R | R | AAA | | University of the Pacific | |
| 14 | 388 | June-Reg | Anthony Rich | SS | | | | | | A | | Rollins College | |
| 15 | 416 | June-Reg | Billy Hall | p | 20 | 6-0 | 200 | R | R | A+ | | Crowder College | |
| 16 | 444** | June-Reg | Chris Crawford | p | 16 | 6-3 | 215 | R | R | A+ | | Marquette University | |
| 17 | 472** | June-Reg | Donzell McDonald | OF | 19 | 5-11 | 180 | B | R | MLB | 2001-2002 | Trinidad State Junior College | |
| 18 | 500 | June-Reg | Stephen Fuller | p | 19 | 6-5 | 195 | R | R | A- | | Triton College | |
| 19 | 528 | June-Reg | Mark Sacharko | p | 18 | 6-1 | 200 | R | R | A+ | | Lancaster (Lancaster,TX) | |
| 20 | 556** | June-Reg | Rich Rodrigues | 3B | 18 | 6-2 | 220 | R | R | AA | | De Anza College | |
| 21 | 584 | June-Reg | John Smith | 3B | 17 | 6-2 | 220 | R | R | Rookie | | Auburn (Auburn,NY) | |
| 22 | 612 | June-Reg | Donald Scolaro | 2B | 22 | 5-10 | 170 | R | R | A+ | | Florida Southern College | |
| 23 | 640 | June-Reg | John Halama | p | 22 | 6-5 | 200 | L | L | MLB | 1998-2006 | St. Francis College | |
| 24 | 668 | June-Reg | Ruben Jurado | p | 18 | 6-0 | 185 | R | R | - | | Chino (Chino,CA) | |
| 25 | 696 | June-Reg | Tony Shaver | p | 22 | 5-11 | 185 | R | R | A+ | | Jacksonville State University | |
| 26 | 724 | June-Reg | Chris McFerrin | p | 18 | 6-5 | 190 | L | R | A+ | | McLane (Fresno,CA) | |
| 27 | 752 | June-Reg | Rad Weaver | p | | 6-1 | 195 | R | R | - | | Clark (San Antonio,TX) | |
| 28 | 780 | June-Reg | James Lynch | p | 18 | 6-1 | 200 | R | R | AAA | | Harrison (Evansville,IN) | |
| 29 | 808** | June-Reg | Braxton Whitehead | OF | 18 | 6-2 | 215 | R | R | AA | | Franklin (Roxie,MS) | |
| 30 | 836** | June-Reg | Rosario Ortiz | p | 19 | 6-4 | 215 | R | R | A- | | Globe (Globe,AZ) | |
| 31 | 864 | June-Reg | Ben Smith | p | | | | | | - | | Glebe Collegiate (Nepean,ON) | |
| 32 | 892 | June-Reg | Joe Valenti | 1B | | | | | | - | | Mendon (Pittsford,NY) | |
| 33 | 920 | June-Reg | Joe Palnich | p | | | | | | - | | Panola College | |
| 34 | 948 | June-Reg | Kevin Burns | 1B | 18 | 6-5 | 220 | L | L | AAA | | Texarkana College | |
| 35 | 976 | June-Reg | Stacy Chupailo | p | | | | | | - | | Mona Shores (Muskegon,MI) | |
| 36 | 1004 | June-Reg | Michael Fee | p | | | | | | - | | Gibbs (St. Petersburg,FL) | |
| 37 | 1032 | June-Reg | Cory Lusk | p | | | | | | - | | Dundee-Crown (Carpentersville,IL) | |
| 38 | 1060 | June-Reg | Rob Aronson | p | | | | | | - | | Eastern Connecticut State University | |
| 39 | 1088 | June-Reg | Shane Gift | p | | | | | | - | | Central Arizona College | |
| 40 | 1115 | June-Reg | Prenenyer Rodriguez | p | | | | | | - | | McCutcheon (Lafayette,IN) | |
| 41 | 1141** | June-Reg | Peter Cervantes | p | 19 | 6-2 | 185 | L | R | AAA | | East Los Angeles College | |
| 42 | 1167** | June-Reg | Ralph Cadima | p | | | | | | - | | Mount San Antonio College | |
| 43 | 1193 | June-Reg | Julio Lugo | SS | 18 | 6-1 | 165 | R | R | MLB | 2000-2009 | Connors State College | |
| 44 | 1219 | June-Reg | Michael Eikenberry | p | | | | | | - | | Lincoln Trail College | |
| 45 | 1245 | June-Reg | Erik Augustin | of | | | | | | - | | Norristown Area (Norristown,PA) | |
| 46 | 1269** | June-Reg | Jay Spurgeon | p | 17 | 6-6 | 211 | R | R | MLB | 2000-2000 | Yosemite (Oakhurst,CA) | |
| 47 | 1292 | June-Reg | Kelly Johnson | p | | | | | | - | | Walla Walla Community College | |
| 48 | 1313 | June-Reg | Robert Mills | 3B | | | | | | - | | Henderson (Henderson,TX) | |
| 49 | 1333 | June-Reg | Jonathan Black | p | | | | | | - | | Texarkana College | |
| 50 | 1353 | June-Reg | J.D. Prestash | p | 18 | 6-2 | 190 | L | L | Rookie | | West Branch (Allport,PA) | |
| 51 | 1373 | June-Reg | Casey Baker | of | | | | | | - | | Fresno City College | |
| 52 | 1393 | June-Reg | Trevor Zwaan | p | | | | | | - | | Prince Andrew (Dartmouth,NS) | |
| 53 | 1412 | June-Reg | John Rodriguez | of | | | | | | - | | Connors State College | |
| 54 | 1431 | June-Reg | Scott Bronowicz | C | 18 | 5-11 | 195 | L | R | A+ | | Shaler Area (Glenshaw,PA) | |
| 55 | 1448 | June-Reg | Dustin Spencer | p | 19 | 6-1 | 190 | R | R | - | | Cuesta College | |
| 56 | 1464** | June-Reg | Stephen Dye | p | | | | | | - | | Butler (Augusta,GA) | |
| 57 | 1480 | June-Reg | Petey Watts | of | | | | | | - | | Pike County (Zebulon,GA) | |
| 58 | 1496 | June-Reg | Dale Davis | p | | | | | | - | | Trinity (Euless,TX) | |
| 59 | 1511** | June-Reg | Clint Weibl | p | 19 | 6-3 | 180 | R | R | AAA | | Odessa College | |
| 60 | 1524** | June-Reg | Elvin Nina | p | 18 | 6-0 | 185 | R | R | AAA | | Northeastern Oklahoma A&M College | |
| 61 | 1537 | June-Reg | Kevin Parker | SS | | | | | | - | | Texarkana College | |
| 62 | 1549** | June-Reg | Chad Berryman | p | 17 | 6-3 | 190 | R | R | A+ | | A.L. Brown (Kannapolis,NC) | |
| 63 | 1561 | June-Reg | Reed Goemann | p | 18 | 6-3 | 175 | L | L | Ind | | Elk Grove (Elk Grove,CA) | |
| 64 | 1573** | June-Reg | Paul Hoover | SS | 18 | 6-1 | 210 | R | R | MLB | 2001-2009 | Steubenville (Steubenville,OH) | $0 |
| 65 | 1584** | June-Reg | Mark Manbeck | p | 19 | 6-2 | 185 | R | R | A | | Galveston College | |
| 66 | 1593 | June-Reg | Justin Bowser | p | | | | | | - | | Seward County Community College | |
| 67 | 1602 | June-Reg | Jeffrey Conner | C | | | | | | - | | Colonial (Orlando,FL) | |
| 68 | 1611 | June-Reg | Barney Albritton | p | | | | | | - | | Parklane (McComb,MS) | |
| 69 | 1620 | June-Reg | Brad Hardtke | 3B | | | | | | Ind | | Leland (San Jose,CA) | |
| 70 | 1628 | June-Reg | Daryl Jones | of | | | | | | - | | Bossier (Bossier City,LA) | |
| 71 | 1636** | June-Reg | Johnny Estrada | of | 18 | 5-11 | 195 | B | R | MLB | 2001-2008 | Roosevelt (Fresno,CA) | |
| 72 | 1643** | June-Reg | Brent Husted | SS | 18 | 6-3 | 198 | R | R | AAA | | Santa Teresa (San Jose,CA) | |
| 73 | 1650** | June-Reg | Jim Chamblee | p | 19 | 6-4 | 175 | R | R | MLB | 2003-2003 | Odessa College | |
| 74 | 1657 | June-Reg | Brian Thompson | p | 23 | 6-1 | 205 | R | R | - | | Howard College | |
| 75 | 1664 | June-Reg | Jason Middleton | p | | | | | | - | | Fort Myers (Fort Myers,FL) | |
| 76 | 1668 | June-Reg | Ryan Anschuetz | p | | | | | | - | | Edison State College | |
| 77 | 1672 | June-Reg | Tim Worthen | 1B | | | | | | - | | Limestone Community (Bartonville,IL) | |
| 78 | 1675 | June-Reg | Canaan Price | SS | | | | | | - | | Palm Desert (Palm Desert,CA) | |
| 79 | 1678 | June-Reg | Jay Wright | p | | | | | | - | | New Mexico Highlands University | |
| 80 | 1681 | June-Reg | Derek Ballard | 1B | | | | | | - | | Moon Valley (Phoenix,AZ) | |
| 81 | 1683 | June-Reg | Jeff Malhews | p | | | | | | - | | Vassar (Vassar,MI) | |
| 82 | 1685 | June-Reg | Javier Encinia | p | | | | | | - | | Blinn College | |
| 83 | 1687 | June-Reg | Jonathan Echols | C | | | | | | - | | Connors State College | |
| 84 | 1689 | June-Reg | Matt Reed | 2B | | | | | | - | | Mississippi Delta Community College | |
| 85 | 1691 | June-Reg | Shane Howeh | 1B | | | | | | - | | Andrew Hill (San Jose,CA) | |
| 86 | 1693 | June-Reg | Michael Constantino | p | | | | | | - | | Manatee (Bradenton,FL) | |
| 87 | 1695 | June-Reg | Brian Statkin | p | | | | | | - | | Lassen Community College | |
| 88 | 1697 | June-Reg | Brian Tickell | p | 19 | 6-2 | 185 | R | R | A | | McLennan Community College | |
| 89 | 1698 | June-Reg | Paul Powell | p | | | | | | - | | Texarkana College | |
| 90 | 1699 | June-Reg | James Sapp | of | | | | | | - | | Monroe Community College | |
| 91 | 1700 | June-Reg | Marcus Scott | of | | | | | | - | | Palm Springs (Palm Springs,CA) | |
| 92 | 1701 | June-Reg | Tyler Steketee | p | | | | | | - | | Jenison (Jenison,MI) | |
| 93 | 1702** | June-Reg | Michael Glavine | 1B | 21 | 6-3 | 210 | L | L | MLB | 2003-2003 | Northeastern University | |
| 94 | 1703 | June-Reg | Jeremie Durden | of | | | | | | - | | Huntington (Shreveport,LA) | |
| 95 | 1704** | June-Reg | Karl Chatman | of | 19 | 6-1 | 190 | R | R | A+ | | Galveston College | |
| 96 | 1705 | June-Reg | Juan Rivera | SS | | | | | | - | | Cypress Creek (Orlando,FL) | |
| 97 | 1706 | June-Reg | Doug Rummel | p | | | | | | - | | Lake Travis (Austin,TX) | |
| 98 | 1707 | June-Reg | Cameron Saska | p | | | | | | - | | Granite Hills (El Cajon,CA) | |