| 2 | 44 | June-Reg | John Posey | OF | | | | | | AAA | | Campbell University | |
| 3 | 71 | June-Reg | Mike Lehman | C | | | | | | AAA | | Vallivue (Caldwell,ID) | |
| 4 | 97 | June-Reg | Doug Cinnella | P | 22 | 6-0 | 185 | R | R | AAA | | Seton Hall University | |
| 5 | 123 | June-Reg | Craig Lopez | P | | | | | | A+ | | Virginia Commonwealth University | |
| 6 | 149 | June-Reg | Tom Michno | P | | | | | | AA | | Columbus State University | |
| 7 | 175 | June-Reg | Bill Kler | OF | | | | | | Rookie | | Milwaukie (Milwaukie,OR) | |
| 8 | 201 | June-Reg | Terry Crowley | SS | | | | | | AA | | Dulaney (Timonium,MD) | |
| 9 | 227 | June-Reg | Blaine Beatty | P | 22 | 6-2 | 185 | L | L | MLB | 1989-1991 | Baylor University | |
| 10 | 253 | June-Reg | Ken Adderley | OF | | | | | | A+ | | Florida International University | |
| 11 | 279 | June-Reg | Dale Barry | P | | | | | | A+ | | Texas A&M University | |
| 12 | 305 | June-Reg | Walt Harris | OF | 22 | | | | | AAA | | Stanford University | |
| 13 | 331 | June-Reg | Steve Sonneberger | p | | | | | | AA | | Middle Tennessee State University | |
| 14 | 357 | June-Reg | Gordon Dillard | p | 22 | 6-1 | 190 | L | L | MLB | 1988-1989 | Oklahoma State University | |
| 15 | 383 | June-Reg | William Jones | p | | | | | | - | | Palatka (Palatka,FL) | |
| 16 | 409 | June-Reg | Larry Mims | 2B | | | | | | AA | | University of Nebraska | |
| 17 | 435 | June-Reg | Randy Strijek | SS | | | | | | AA | | Western Kentucky University | |
| 18 | 461** | June-Reg | Bill Narleski | SS | | | | | | A | | University of Virginia | |
| 19 | 487 | June-Reg | Steven Williams | p | | | | | | - | | Upsala College | |
| 20 | 513 | June-Reg | Walt Wallen | 3B | | | | | | A- | | University of South Carolina-Aiken | |
| 21 | 539 | June-Reg | Richard Winzenread | p | | | | | | A- | | Hanover College | |
| 22 | 565 | June-Reg | Mark Morawski | 2B | | | | | | Rookie | | Eckerd College | |
| 23 | 589** | June-Reg | Jim Huslig | p | | | | | | A | | Shawnee Mission East (Shawnee Mission,KS) | |
| 24 | 612 | June-Reg | Daniel Bench | OF | | | | | | - | | Northeast (St. Petersburg,FL) | |
| 25 | 635 | June-Reg | Rob Walton | p | | | | | | AA | | Oklahoma State University | |
| 26 | 657 | June-Reg | Tracey Pancoski | OF | | | | | | A+ | | Brookdale Community College | |
| 27 | 679** | June-Reg | David Briggs | 1B-OF | | | | | | A | | Rumson Fair Haven (Rumson Fair Haven,NJ) | |
| 28 | 699 | June-Reg | Mike Shambaugh | 1B | | | | | | A- | | Oral Roberts University | |
| 29 | 719 | June-Reg | Charles Tanton | OF | | | | | | - | | Lee College | |
| 30 | 738 | June-Reg | Jim DePalo | OF | | | | | | - | | Harvard University | |
| 31 | 755 | June-Reg | Robert Cox | OF-1B | | | | | | - | | Anne Arundel Community College | |
| 32 | 770 | June-Reg | Mark Bookmeyer | OF | | | | | | - | | Lee College | |
| 33 | 785 | June-Reg | Chris Klyczek | 2B | | | | | | Rookie | | St. Benedictine (Chicago,IL) | |
| 34 | 797 | June-Reg | Tommy Raffo | p-1B | 18 | 6-3 | 200 | R | L | A+ | | Bishop Kenny (Jacksonville,FL) | |
| 35 | 808 | June-Reg | Matthew Radzik | C | | | | | | A- | | Indian Hills Community College-Centerville | |
| 36 | 819 | June-Reg | Matthew Nowak | 3B | | | | | | A+ | | Missouri State University | |
| 37 | 830** | June-Reg | Rob Lukachyk | SS | 17 | 6-0 | 185 | L | R | MLB | 1996-1996 | Henry Hudson (Highlands,NJ) | |
| 38 | 840** | June-Reg | John Fowler | SS | | | | | | A+ | | | |
| 39 | 849 | June-Reg | Darren Villani | 3B | | | | | | - | | West Windsor-Plainsboro (Princeton Junction,NJ) | |
| 40 | 857 | June-Reg | Craig Marshall | p | | | | | | - | | Pittsburg (Pittsburg,KS) | |
| 41 | 863** | June-Reg | Dell Ahalt | SS | | | | | | A+ | | Hagerstown Community College | |
| 42 | 869** | June-Reg | Doug Shields | SS | 18 | 6-0 | 180 | R | R | AA | | La Salle (Cincinnati,OH) | |
| 43 | 875 | June-Reg | Franklin Martz | 2B | 19 | 5-10 | 202 | L | R | Rookie | | Frederick Community College | |
| 44 | 880 | June-Reg | Eric Cox | C | | | | | | - | | Esperanza (Anaheim,CA) | |
| 45 | 884 | June-Reg | Phil Williams | C | | | | | | - | | University of Hawaii | |
| 46 | 886 | June-Reg | Rod Steiner | 3B | | | | | | - | | Seminole Community College | |
| 47 | 888 | June-Reg | Casey Moore | C | | | | | | - | | Loyola Academy (Chicago,IL) | |
| 48 | 890 | June-Reg | David Arendas | SS | | | | | | - | | West Windsor-Plainsboro (Princeton Junction,NJ) | |
| 49 | 891 | June-Reg | Daniel Johnston | 2B | | | | | | - | | Manual (Indianapolis,IN) | |
| 1 | 26 | June-Sec | Paris Hayden | OF | | | | | | AA | | Indian River State College | |
| 2 | 49** | June-Sec | Jaime Navarro | P | 18 | 6-4 | 230 | R | R | MLB | 1989-2000 | Miami-Dade College | |
| 3 | 67 | June-Sec | Ray Schuyler | OF | | | | | | - | | County College of Morris | |
| 1 | 15** | Jan-Reg | Glenn Twardy | OF | | | | | | A- | | Cerritos College | |
| 2 | 41** | Jan-Reg | Jaime Navarro | P | 18 | 6-4 | 230 | R | R | MLB | 1989-2000 | Miami-Dade College | |
| 3 | 67** | Jan-Reg | Joel Smith | OF | | | | | | A+ | | Middle Georgia College | |
| 4 | 93** | Jan-Reg | Paris Hayden | OF | | | | | | AA | | Indian River State College | |
| 5 | 119** | Jan-Reg | David Taylor | P | | | | | | - | | McLennan Community College | |
| 6 | 145** | Jan-Reg | Jeff Gidcumb | P | | | | | | College | | Florida Community College | |
| 7 | 171 | Jan-Reg | Robert Williams | P | 22 | 6-3 | 225 | R | R | AA | | University at Buffalo | |
| 8 | 197 | Jan-Reg | Ricky Carriger | P | | | | | | AA | | Northeastern Oklahoma A&M College | |
| 9 | 222 | Jan-Reg | Todd Nash | OF | | | | | | - | | Golden West College | |
| 10 | 247** | Jan-Reg | Rafael Bournigal | IF | 20 | 5-11 | 176 | R | R | MLB | 1992-1999 | Canada College | |
| 1 | 3 | Jan-Sec | David Miller | P | | | | | | AAA | | Camden County College | |
