| 1 | 12 | June-Reg | Mark Snyder | P | 18 | 6-5 | 210 | R | R | A- | | | |
| 2 | 40 | June-Reg | Jim Wilson | 1B | 21 | 6-3 | 230 | R | R | MLB | 1985-1989 | Oregon State University | |
| 3 | 66 | June-Reg | Chad Squires | C | | | | | | - | | Gahr (Cerritos,CA) | |
| 4 | 92 | June-Reg | Andrew Ortiz | P | 20 | 6-3 | 180 | L | L | AA | | New Jersey City University | |
| 5 | 118 | June-Reg | Pookie Bernstine | OF | 21 | 5-10 | 175 | B | R | AAA | | Lewis-Clark State College | |
| 6 | 144 | June-Reg | Chris Cawthon | OF | 22 | 6-5 | 215 | L | R | A | | Florida State University | |
| 7 | 170** | June-Reg | Carlos Diaz | C | 17 | 6-3 | 195 | R | R | MLB | 1990-1990 | St Mary of the Assumption (Hackettstown,NJ) | |
| 8 | 196 | June-Reg | Wes Pierorazio | P | 21 | 6-3 | 205 | L | L | AA | | Long Island University-Brooklyn Campus | |
| 9 | 222 | June-Reg | Andre Holmes | OF | | | | | | A- | | Monrovia (Monrovia,CA) | |
| 10 | 248 | June-Reg | Rick Filippo | P | | | | | | A- | | University of Illinois | |
| 11 | 274 | June-Reg | Jay Keeler | P | 23 | 6-0 | 180 | B | R | AA | | Florida State University | |
| 13 | 325 | June-Reg | Jeff Barkley | p | 22 | 6-3 | 185 | B | R | MLB | 1984-1985 | The Citadel | |
| 14 | 351 | June-Reg | Rod Peters | 2B | | | | | | A+ | | George Washington University | |
| 15 | 377 | June-Reg | Charlie Mitchell | 2B | 20 | 6-3 | 170 | R | R | MLB | 1984-1985 | West Chester University of Pennsylvania | |
| 16 | 403 | June-Reg | Dwight Madison | OF | | | | | | A- | | Georgetown University | |
| 17 | 429** | June-Reg | Chris Knabenshue | OF | 18 | 6-1 | 185 | L | R | AAA | | Smoky Hill (Aurora,CO) | |
| 18 | 455 | June-Reg | Mark Fagan | p | | | | | | A- | | Ithaca College | |
| 19 | 481 | June-Reg | Dave McCarthy | p | | | | | | - | | Amherst College | |
| 20 | 507** | June-Reg | Casey Close | p-OF | | | | | | AAA | | Worthington Christian (Worthington,OH) | |
| 21 | 532 | June-Reg | Paul Beck | p | | | | | | A- | | Murray (Murray,UT) | |
| 22 | 557** | June-Reg | Doug Little | p | | | | | | AAA | | North Shore (West Palm Beach,FL) | |
| 23 | 582** | June-Reg | Steve Kordish | p | | | | | | AA | | Princeton University | |
| 24 | 607 | June-Reg | Wayne Dale | OF | | | | | | A | | Campbell University | |
| 25 | 632** | June-Reg | Bill McGuire | C | 18 | 6-3 | 205 | R | R | MLB | 1988-1989 | Creighton Prep (Omaha,NE) | |
| 26 | 657 | June-Reg | Joseph Lafelice | SS | | | | | | - | | Euclid (Euclid,OH) | |
| 27 | 681** | June-Reg | Robbie Cobb | 2B | | | | | | A+ | | Ohio State University | |
| 28 | 704 | June-Reg | Richard Burkett | p | | | | | | - | | Hartsville (Hartsville,SC) | |
| 29 | 727 | June-Reg | Edward Clark | p | 17 | 6-2 | 170 | B | L | A | | Charlottesville (Charlottesville,VA) | |
| 30 | 747 | June-Reg | Mike Connolly | p | | | | | | A- | | East Bridgewater (East Bridgewater,MA) | |
| 31 | 764 | June-Reg | Daniel Neal | p | | | | | | - | | University of Wyoming | |
| 1 | 2** | June-Sec | Brian Howard | SS-2B | | | | | | A- | | | |
| 2 | 27 | June-Sec | Edward Emmons | P | | | | | | A- | | South Florida Community College | |
| 3 | 50** | June-Sec | Dennis Wood | OF | | | | | | - | | Spartanburg Methodist College | |
| 4 | 66** | June-Sec | Ricky Hester | OF | | | | | | A+ | | Clemson University | |
| 5 | 77 | June-Sec | Mark Barbagelata | SS | | | | | | A- | | College of Southern Idaho | |
| 1 | 11 | Jan-Reg | Tracy Echols | OF | | | | | | A | | Georgia Perimeter College | |
| 2 | 37 | Jan-Reg | James Jefferson | P | | | | | | - | | Palm Beach Community College | |
| 3 | 63 | Jan-Reg | Rod Carraway | iF-Of | | | | | | A | | University of South Carolina | |
| 4 | 89 | Jan-Reg | Craig Kiley | OF | | | | | | A- | | SUNY-Farmingdale | |
| 5 | 115 | Jan-Reg | Kelvin Stovall | OF | | | | | | A- | | Georgia Perimeter College | |
| 6 | 141** | Jan-Reg | Jeff Gyarmati | P | | | | | | A | | Mercer County Community College | |
| 7 | 166 | Jan-Reg | Kerry Kohler | C | | | | | | - | | County College of Morris | |
| 8 | 191 | Jan-Reg | Steve White | P | | | | | | - | | Mercer County Community College | |
| 9 | 214 | Jan-Reg | Moses Coleman | 1B | | | | | | A- | | Brewton-Parker College | |
| 10 | 234 | Jan-Reg | Paul Wil lams | OF | | | | | | - | | Mesa Community College | |
| 11 | 252 | Jan-Reg | John Charboneau | OF | | | | | | - | | Cuyahoga Community College | |
| 12 | 267 | Jan-Reg | James Hill | P | | | | | | - | | Faulkner University | |
| 13 | 278 | Jan-Reg | Richard Howroyd | C | | | | | | A- | | | |
| 14 | 287 | Jan-Reg | John Murray | 3B | | | | | | - | | Georgia Perimeter College | |
| 1 | 16 | Jan-Sec | Craig Holthus | OF | | | | | | - | | Fruita Monument (Grand Junction,CO) | |
| 2 | 40 | Jan-Sec | John Thornton | 1B | | | | | | AA | | Baltimore City Community College | |
| 3 | 56 | Jan-Sec | Robert Gilchrist | P | | | | | | - | | | |
