| 1 | 7 | June-Reg | Daryl Boston | P-OF | 18 | 6-3 | 203 | L | L | MLB | 1984-1994 | Woodward (Cincinnati,OH) | |
| 3 | 59 | June-Reg | Bill Babcock | P | | | | | | AA | | Grosse Point North (Grosse Point Woods,MI) | |
| 4 | 84 | June-Reg | Craig Smajstria | SS | 19 | 5-9 | 165 | B | R | MLB | 1988-1988 | Pearland (Pearland,TX) | |
| 5 | 110** | June-Reg | Greg McClain | 3B-OF | | | | | | A | | Pasadena (Pasadena,CA) | |
| 6 | 136 | June-Reg | Max Diaz | 3B-P | | | | | | Rookie | | American (Fremont,CA) | |
| 7 | 162 | June-Reg | Mike Withrow | P | | | | | | AA | | University of Texas | |
| 8 | 188 | June-Reg | Wade Rowdon | SS | 20 | 6-2 | 180 | R | R | MLB | 1984-1988 | Stetson University | |
| 9 | 214 | June-Reg | Greg Butier | P | | | | | | - | | Lodi (Lodi,CA) | |
| 10 | 240 | June-Reg | Mike Tanzi | P | | | | | | AA | | Florida Southern College | |
| 11 | 266 | June-Reg | Charles Epperson | OF | | | | | | A | | Jackson State University | |
| 12 | 292 | June-Reg | Eddie Miles | OF | | | | | | AA | | University of Louisville | |
| 13 | 318 | June-Reg | Al Jones | p | 22 | 6-4 | 210 | R | R | MLB | 1983-1985 | Alcorn State University | |
| 14 | 344 | June-Reg | Dave Yobs | OF | | | | | | AAA | | Oral Roberts University | |
| 15 | 370 | June-Reg | Mike Bertotti | SS | | | | | | - | | Lassen (Susanville,CA) | |
| 16 | 396 | June-Reg | Kevin Jones | OF | | | | | | Rookie | | Lincoln (San Diego,CA) | |
| 17 | 422 | June-Reg | Richard Smith | SS | | | | | | - | | Vallejo (Vallejo,CA) | |
| 18 | 448 | June-Reg | Michael Buggs | OF | | | | | | A | | University of California | |
| 19 | 474 | June-Reg | Pat Adams | 1B | | | | | | AAA | | University of Detroit Mercy | |
| 20 | 500 | June-Reg | Donn Koch | C | 22 | 6-2 | 215 | R | R | A | | Florida Southern College | |
| 21 | 526 | June-Reg | Jack Hardy | p | 21 | 6-2 | 175 | R | R | MLB | 1989-1989 | Saint Thomas University | |
| 22 | 552 | June-Reg | Jim Harris | OF | | | | | | Rookie | | University of Nevada | |
| 23 | 577 | June-Reg | Mark Heuer | p | | | | | | AAA | | Harper College | |
| 24 | 602 | June-Reg | Jim Sutton | p | | | | R | R | A | | Cal State Fullerton | |
| 25 | 626 | June-Reg | Mike Ledna | 2B | | | | | | Rookie | | Purdue University | |
| 26 | 649 | June-Reg | Mike Nagle | SS | | | | | | A | | University of California-Irvine | |
| 27 | 672** | June-Reg | Steve Lannini | OF | | | | | | A+ | | Colonial (Orlando,FL) | |
| 28 | 694 | June-Reg | Jason Costa | OF | | | | | | Rookie | | Castro Valley (Castro Valley,CA) | |
| 29 | 716 | June-Reg | Roger Stevens | OF | | | | | | Rookie | | Elgin Community College | |
| 30 | 736 | June-Reg | LaVel Freeman | 1B | 18 | 5-9 | 170 | L | L | MLB | 1989-1989 | | |
| 31 | 754 | June-Reg | Richie Hines | 1B | | | | | | - | | Hill (Jackson,MS) | |
| 32 | 771 | June-Reg | Ed Vidmar | p | | | | | | - | | University of Arkansas | |
| 33 | 787 | June-Reg | Art Niemann | p | | | | | | A | | Louisiana Tech University | |
| 34 | 801 | June-Reg | Mark Johnson | C | | | | | | - | | North Boone (Poplar Grove,IL) | |
| 35 | 813** | June-Reg | Roger Johnson | Of | | | | | | AA | | Parkway West (Ballwin,MO) | |
| 36 | 822 | June-Reg | John Walsh | 2B | | | | | | Rookie | | Westmont (Campbell,CA) | |
| 37 | 831 | June-Reg | Billy Gayton | 3B | | | | | | A- | | Indian Hills Community College-Centerville | |
| 38 | 837** | June-Reg | Mike Toothman | Of | | | | | | A- | | Stanford University | |
| 1 | 3** | June-Sec | Norman Morton | P | | | | | | - | | Miami-Dade College | |
| 2 | 28** | June-Sec | John Leonard | P | | | | | | Rookie | | Yavapai College | |
| 1 | 8** | Jan-Reg | Reggie Montgomery | OF | 18 | 6-4 | 220 | R | R | AAA | | Orange County Community College | |
| 2 | 34** | Jan-Reg | Greg Griffin | OF | | | | | | AA | | University of Texas-Brownsville and Texas Southmost College | |
| 3 | 60 | Jan-Reg | James Twardowski | 3B | | | | | | - | | Blinn College | |
| 4 | 86 | Jan-Reg | John Moses | P | 23 | 5-10 | 170 | B | L | MLB | 1982-1992 | | |
| 5 | 112 | Jan-Reg | Kevin Kollmansperger | P | | | | | | - | | McLennan Community College | |
| 6 | 138 | Jan-Reg | Ed Sedar | OF-if | 19 | 6-1 | 190 | R | R | AA | | College of Lake County | |
| 7 | 163 | Jan-Reg | Bobby Joe Williams | SS | | | | | | - | | Panola College | |
| 8 | 188** | Jan-Reg | Charlie Corbell | P | | | | | | AAA | | Blinn College | |
| 9 | 206 | Jan-Reg | Mark Dennis | P | | | | | | - | | McLennan Community College | |
| 10 | 223** | Jan-Reg | Dave Van Horn | 3B | | | | | | A+ | | McLennan Community College | |
| 11 | 240 | Jan-Reg | Gary Jones | OF | | | | | | - | | Paris Junior College | |
| 12 | 252 | Jan-Reg | Curtis Dishman | 1B | | | | | | A- | | Blinn College | |
| 13 | 264 | Jan-Reg | Alceed Owens | p | | | | | | - | | University of Texas-Brownsville and Texas Southmost College | |
| 14 | 275 | Jan-Reg | Todd Edwards | SS | 19 | 5-10 | 173 | B | R | A+ | | Blinn College | |
| 15 | 285 | Jan-Reg | Doug Galloway | p | | | | | | - | | Paris Junior College | |
| 16 | 294 | Jan-Reg | Joe Petty | p | | | | | | - | | Panola College | |
| 1 | 20 | Jan-Sec | Scott Meier | C | | | | | | AA | | San Joaquin Delta College | |
| 2 | 46** | Jan-Sec | Frank Marrero | P | | | | | | A | | Miami-Dade College | |
