| # | Player Name | Pos | Team | Age | Born | Ht | Wt | B-T | High Level | MLB Years | Drafted From |
| 985. | Cortney Hill | | TB | | | | | - | College | | Eastern Oklahoma State College |
| 986. | Mike Flannery | P | FLA | 19 | 9/20/1979 | 6-1 | 205 | R-R | AAA | | Gloucester County College |
| 987. | Jason Frasor | P | DET | 21 | 8/9/1977 | 5-10 | 170 | R-R | MLB | 2004-2008 | Southern Illinois University |
| 988. | Joseph Yakopich | SS | ARI | 18 | 6/19/1981 | 6-0 | 175 | L-R | A+ | | St. Thomas of Villanova High School (Amherstburg,ON) |
| 989. | Billy Keppinger | LF | MIN | 20 | 12/15/1978 | 6-0 | 195 | L-L | AA | | Lake City Community College |
| 990. | Victor Rosario | OF | MTL | 18 | 12/26/1980 | 5-9 | 175 | L-R | A | - | Sandalwood High School (Jacksonville,FL) |
| 991. | Mike Clay | SS-C | KC | 22 | 10/3/1976 | 6-0 | 200 | R-R | A | | Southeastern Oklahoma State University |
| 992. | Michael Sabens | P | PIT | 22 | 1/21/1977 | 6-1 | 200 | R-R | A | | Berry College |
| 993. | Alex Coleman | | OAK | 17 | 8/3/1981 | 6-3 | 210 | R-R | College | | Poly High School (Long Beach,CA) |
| 994. | Chris Schilling | C | MIL | 18 | 1/14/1981 | 5-11 | 192 | R-R | Rookie | | D W Daniel High School (Central,SC) |
| 995. | Chuck Lopez | CF | SEA | 22 | 11/29/1976 | 6-1 | 195 | L-L | AA | - | Long Beach State University |
| 996. | Dean Muthig | 3B | PHI | 21 | 8/24/1977 | 5-11 | 205 | R-R | A- | | Carthage College |
| 997. | James Phillips | P | BAL | 18 | 10/24/1980 | 6-2 | 180 | R-R | Rookie | | Maysville High School (Zanesville,OH) |
| 998. | Jason Howard | C | CIN | 22 | 9/26/1976 | 6-3 | 210 | R-R | A | | East Carolina University |
| 999. | Tony Neal | P | CHW | 18 | 9/12/1980 | 6-2 | 205 | R-R | A+ | | Faulkner State Community College |
| 1000. | Darren Clarke | P | COL | 18 | 3/19/1981 | 6-8 | 235 | R-R | MLB | 2007-2007 | Plant High School (Tampa,FL) |
| 1001. | Timothy Boeth | 3B-SS | ANA | | | | 0 | - | A- | | University of Central Florida |
| 1002. | Bo Hart | 2B | STL | 22 | 9/27/1976 | 5-11 | 175 | R-R | MLB | 2003-2004 | Gonzaga University |
| 1003. | Collin Perschon | P | TOR | 18 | 8/13/1980 | 6-4 | 225 | R-R | - | | Bellevue Community College |
| 1004. | Clifton Wren | C | LA | 22 | 4/13/1977 | 6-1 | 220 | R-R | A+ | | Mississippi State University |
| 1005. | Tony Piazza | C | TEX | 19 | 6/22/1980 | 6-2 | 215 | R-R | AAA | | Fairview High School (Cody,WY) |
| 1006. | Lionel Rogers | P | NYM | 21 | 10/29/1977 | 5-11 | 170 | R-R | A- | | Freed-Hardeman University |
| 1007. | Scott Thomas | C | CLE | 14 | 3/21/1985 | 5-11 | 202 | L-R | AA | | Watervliet High School (Watervliet,MI) |
| 1008. | Kavonski Chatman | P-CF | SF | | | | 0 | - | - | | Northeast Texas Community College |
| 1009. | Perry Miley | CF | BOS | | | | 0 | - | A- | | William Carey College |
| 1010. | Greg Hanoian | CF | CHC | | | | 0 | - | - | | USC |
| 1011. | Santiago Narciandi | C | NYY | | | | 0 | - | - | | Miami-Dade College |
| 1012. | Shawn Hill | P | SD | 18 | 4/28/1981 | 6-2 | 185 | R-R | MLB | 2004-2008 | Bishop PF Reding High School (Georgetown,ON) |
| 1013. | Steven Hoover | OF | HOU | 21 | 8/11/1977 | 6-2 | 205 | R-R | A- | | Cal State Stanislaus |
| 1014. | Thomas Parrott | 3B | ATL | 18 | 9/22/1980 | 6-1 | 205 | R-R | A- | | Merritt Island High School (Merritt Island,FL) |